diff options
Diffstat (limited to 'wqflask/tests/unit')
| -rw-r--r-- | wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py b/wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py index 2bbeab1f..a8cf6006 100644 --- a/wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py +++ b/wqflask/tests/unit/wqflask/correlation/test_correlation_functions.py @@ -1,10 +1,30 @@ +"""module contains tests for correlation functions""" + import unittest from unittest import mock + from wqflask.correlation.correlation_functions import get_trait_symbol_and_tissue_values from wqflask.correlation.correlation_functions import cal_zero_order_corr_for_tiss class TestCorrelationFunctions(unittest.TestCase): + """test for correlation helper functions""" + + @mock.patch("wqflask.correlation.correlation_functions.compute_corr_coeff_p_value") + def test_tissue_corr_computation(self, mock_tiss_corr_computation): + """test for cal_zero_order_corr_for_tiss""" + + primary_values = [9.288, 9.313, 8.988, 9.660, 8.21] + target_values = [9.586, 8.498, 9.362, 8.820, 8.786] + + mock_tiss_corr_computation.return_value = (0.51, 0.7) + + results = cal_zero_order_corr_for_tiss(primary_values, target_values) + mock_tiss_corr_computation.assert_called_once_with( + primary_values=primary_values, target_values=target_values, + corr_method="pearson") + + self.assertEqual(len(results), 3) @mock.patch("wqflask.correlation.correlation_functions.MrnaAssayTissueData") def test_get_trait_symbol_and_tissue_values(self, mock_class): |