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Diffstat (limited to 'wqflask/output/HLC_output1.log.txt')
| -rwxr-xr-x | wqflask/output/HLC_output1.log.txt | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/wqflask/output/HLC_output1.log.txt b/wqflask/output/HLC_output1.log.txt new file mode 100755 index 00000000..e8461e91 --- /dev/null +++ b/wqflask/output/HLC_output1.log.txt @@ -0,0 +1,28 @@ +## +## GEMMA Version = 0.94 +## +## Command Line Input = -bfile /home/zas1024/gene/web/gemma/HLC -k ../web/gemma/output_HLC.cXX.txt -lmm 1 -o HLC_output1 +## +## Summary Statistics: +## number of total individuals = 427 +## number of analyzed individuals = 427 +## number of covariates = 1 +## number of phenotypes = 1 +## number of total SNPs = 358499 +## number of analyzed SNPs = 273349 +## REMLE log-likelihood in the null model = -3657.8 +## MLE log-likelihood in the null model = -3665.89 +## pve estimate in the null model = 3.30749e-06 +## se(pve) in the null model = nan +## vg estimate in the null model = 16.8101 +## ve estimate in the null model = 1.68101e+06 +## beta estimate in the null model = 890.587 +## se(beta) = 62.7439 +## +## Computation Time: +## total computation time = 1.857 min +## computation time break down: +## time on eigen-decomposition = 0.0015 min +## time on calculating UtX = 0.406 min +## time on optimization = 1.30517 min +## |