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Diffstat (limited to 'wqflask/output/HLC_output.log.txt')
| -rwxr-xr-x | wqflask/output/HLC_output.log.txt | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/wqflask/output/HLC_output.log.txt b/wqflask/output/HLC_output.log.txt new file mode 100755 index 00000000..bfa65d9a --- /dev/null +++ b/wqflask/output/HLC_output.log.txt @@ -0,0 +1,28 @@ +## +## GEMMA Version = 0.94 +## +## Command Line Input = -bfile /home/zas1024/gene/web/gemma/HLC -k ../web/gemma/output_HLC.cXX.txt -lmm 1 -o HLC_output +## +## Summary Statistics: +## number of total individuals = 427 +## number of analyzed individuals = 427 +## number of covariates = 1 +## number of phenotypes = 1 +## number of total SNPs = 358499 +## number of analyzed SNPs = 273349 +## REMLE log-likelihood in the null model = -3650.56 +## MLE log-likelihood in the null model = -3657.67 +## pve estimate in the null model = 0.840196 +## se(pve) in the null model = 0.106606 +## vg estimate in the null model = 4.2245e+06 +## ve estimate in the null model = 265756 +## beta estimate in the null model = 1202.14 +## se(beta) = 24.9475 +## +## Computation Time: +## total computation time = 2.68417 min +## computation time break down: +## time on eigen-decomposition = 0.00166667 min +## time on calculating UtX = 0.417 min +## time on optimization = 2.11733 min +## |