diff options
Diffstat (limited to 'wqflask/maintenance')
| -rw-r--r-- | wqflask/maintenance/browser_test.py | 60 | ||||
| -rw-r--r-- | wqflask/maintenance/correlation_matrix_test.py | 117 | ||||
| -rw-r--r-- | wqflask/maintenance/correlation_test.py | 110 | ||||
| -rw-r--r-- | wqflask/maintenance/marker_regression_test.py | 118 |
4 files changed, 0 insertions, 405 deletions
diff --git a/wqflask/maintenance/browser_test.py b/wqflask/maintenance/browser_test.py deleted file mode 100644 index ecf8e1ca..00000000 --- a/wqflask/maintenance/browser_test.py +++ /dev/null @@ -1,60 +0,0 @@ -from __future__ import print_function, division, absolute_import - -from time import sleep - -import selenium -from selenium import webdriver -from selenium.common.exceptions import NoSuchElementException, ElementNotVisibleException -from selenium.webdriver.common.keys import Keys - -class Test(object): - def __init__(self): - self.browser = webdriver.Chrome('/home/gn2/gn2/webtests/chromedriver') - - def get(self, url): - self.browser.get(url) - sleep(5) - self.title() - - def click(self, xpath_selector): - el = self.browser.find_element_by_xpath(xpath_selector) - text = el.text.strip() or el.get_attribute("value").strip() - el.click() - print("clicked:", text) - sleep(2) - - def click_option(self, xpath_selector, option_text): - el = self.browser.find_element_by_xpath(xpath_selector) - for option in el.find_elements_by_tag_name('option'): - if option.text == option_text: - option.click() # select() in earlier versions of webdriver - break - sleep(2) - - def enter_text(self, xpath_selector, text): - el = self.browser.find_element_by_xpath(xpath_selector) - sleep(10) - el.send_keys(text) - sleep(5) - # Just in case things get mangled by JavaScript, etc. we print the text for testing - self.get_text(xpath_selector) - - def get_text(self, xpath_selector): - el = self.browser.find_element_by_xpath(xpath_selector) - text = el.text.strip() or el.get_attribute("value").strip() - print("text:", text) - - def switch_window(self): - self.browser.switch_to_window(self.browser.window_handles[-1]) - sleep(2) - self.title() - sleep(2) - - - def title(self): - print("title:", self.browser.title) - - -#if __name__ == '__main__': -# import doctest -# doctest.testmod()
\ No newline at end of file diff --git a/wqflask/maintenance/correlation_matrix_test.py b/wqflask/maintenance/correlation_matrix_test.py deleted file mode 100644 index 5f8f10e1..00000000 --- a/wqflask/maintenance/correlation_matrix_test.py +++ /dev/null @@ -1,117 +0,0 @@ -""" - -Test Correlation matrix - ->>> test = Test() ->>> test.get("http://genenetwork.org/") -title: GeneNetwork - -Choose the type ->>> test.click_option('''//*[@id="tissue"]''', 'Hippocampus mRNA') - -Enter the Get Any ->>> test.enter_text('''//*[@id="tfor"]''', 'grin2b') -text: grin2b - -Search ->>> test.click('//*[@id="btsearch"]') - -Select the first 4 records ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[2]/td/input''') ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[3]/td/input''') ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[4]/td/input''') ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[5]/td/input''') - ->>> sleep(5) - -Add to collection page ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[1]/td/table/tbody/tr[1]/td[4]/a''') - ->>> sleep(5) - -A new window is created, so we switch to it ->>> test.switch_window() -title: BXD Trait Collection - -Select all records ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/table/tbody/tr/td/table/tbody/tr/td/table/tbody/tr/td/a/img''') - -Click Matrix ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/table/tbody/tr/td/table/tbody/tr[2]/td/table/tbody/tr/td[2]/a/img''') - -Another new window ->>> test.switch_window() -title: Correlation Matrix - -Sleep a bunch because this can take a while ->>> sleep(10) - -Ensure that the correlation between Trait3 (HC_M2_0606_P::1457003_at) and Trait4 (HC_M2_0606_P::1422223_at) is 0.608 ->>> test.get_text('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/blockquote/table/tbody/tr[5]/td[5]/a/font''') -text: 0.608\n71 - -""" - -from __future__ import print_function, division, absolute_import - -from time import sleep - -import selenium -from selenium import webdriver -from selenium.common.exceptions import NoSuchElementException, ElementNotVisibleException -from selenium.webdriver.common.keys import Keys - -from browser_test import Test -# -#class Test(object): -# def __init__(self): -# self.browser = webdriver.Chrome('/home/gn2/gn2/webtests/chromedriver') -# -# def get(self, url): -# self.browser.get(url) -# sleep(5) -# self.title() -# -# def click(self, xpath_selector): -# el = self.browser.find_element_by_xpath(xpath_selector) -# #text = el.text.strip() or el.get_attribute("value").strip() -# el.click() -# #print("clicked:", text) -# sleep(2) -# -# def click_option(self, xpath_selector, option_text): -# el = self.browser.find_element_by_xpath(xpath_selector) -# for option in el.find_elements_by_tag_name('option'): -# if option.text == option_text: -# option.click() # select() in earlier versions of webdriver -# break -# sleep(2) -# -# def enter_text(self, xpath_selector, text): -# el = self.browser.find_element_by_xpath(xpath_selector) -# sleep(10) -# el.send_keys(text) -# sleep(5) -# # Just in case things get mangled by JavaScript, etc. we print the text for testing -# self.get_text(xpath_selector) -# -# def get_text(self, xpath_selector): -# el = self.browser.find_element_by_xpath(xpath_selector) -# text = el.text.strip() or el.get_attribute("value").strip() -# print("text:", text) -# -# def switch_window(self): -# self.browser.switch_to_window(self.browser.window_handles[-1]) -# sleep(2) -# self.title() -# sleep(2) -# -# -# def title(self): -# print("title:", self.browser.title) -# -# -# -if __name__ == '__main__': - import doctest - doctest.testmod() diff --git a/wqflask/maintenance/correlation_test.py b/wqflask/maintenance/correlation_test.py deleted file mode 100644 index aaf3f7df..00000000 --- a/wqflask/maintenance/correlation_test.py +++ /dev/null @@ -1,110 +0,0 @@ -""" -Test calculate correlations - ->>> test = Test() ->>> test.get("http://genenetwork.org") -title: GeneNetwork - -Choose the type ->>> test.click_option('''//*[@id="tissue"]''', 'Hippocampus mRNA') - -Enter the Get Any ->>> test.enter_text('''//*[@id="tfor"]''', 'ssh') -text: ssh - -Search ->>> test.click('//*[@id="btsearch"]') -clicked: Search - -Choose the first result ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[2]/td[2]/a''') -clicked: 1455854_a_at - -A new window is created, so we switch to it ->>> test.switch_window() -title: Hippocampus M430v2 BXD 06/06 PDNN : 1455854_a_at: Display Trait - -Click on Calculate Correlations ->>> test.click('''//*[@id="title3"]''') -clicked: Calculate Correlations - -Click on Compute ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p[6]/table/tbody/tr/td/div/div/span/table/tbody/tr/td/input[3]''') -clicked: Compute - -Another new window ->>> test.switch_window() -title: Correlation - -Sleep a bunch because this can take a while ->>> sleep(60) - -Ensure the Sample rho is the exepcted 1.000 because it should be the same record ->>> test.get_text('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/table/tbody/tr[2]/td/div/table/tbody/tr[2]/td[9]/a''') -text: 1.000 - -""" - -from __future__ import print_function, division, absolute_import - -from time import sleep - - -import selenium -from selenium import webdriver -from selenium.common.exceptions import NoSuchElementException, ElementNotVisibleException -from selenium.webdriver.common.keys import Keys - - -class Test(object): - def __init__(self): - self.browser = webdriver.Chrome('/home/gn2/gn2/webtests/chromedriver') - - def get(self, url): - self.browser.get(url) - sleep(5) - self.title() - - def click(self, xpath_selector): - el = self.browser.find_element_by_xpath(xpath_selector) - text = el.text.strip() or el.get_attribute("value").strip() - el.click() - print("clicked:", text) - sleep(2) - - def click_option(self, xpath_selector, option_text): - el = self.browser.find_element_by_xpath(xpath_selector) - for option in el.find_elements_by_tag_name('option'): - if option.text == option_text: - option.click() # select() in earlier versions of webdriver - break - sleep(2) - - def enter_text(self, xpath_selector, text): - el = self.browser.find_element_by_xpath(xpath_selector) - sleep(10) - el.send_keys(text) - sleep(5) - # Just in case things get mangled by JavaScript, etc. we print the text for testing - self.get_text(xpath_selector) - - def get_text(self, xpath_selector): - el = self.browser.find_element_by_xpath(xpath_selector) - text = el.text.strip() or el.get_attribute("value").strip() - print("text:", text) - - def switch_window(self): - self.browser.switch_to_window(self.browser.window_handles[-1]) - sleep(2) - self.title() - sleep(2) - - - def title(self): - print("title:", self.browser.title) - - - -if __name__ == '__main__': - import doctest - doctest.testmod() diff --git a/wqflask/maintenance/marker_regression_test.py b/wqflask/maintenance/marker_regression_test.py deleted file mode 100644 index f4840bd7..00000000 --- a/wqflask/maintenance/marker_regression_test.py +++ /dev/null @@ -1,118 +0,0 @@ -""" -Test calculate correlations - ->>> test = Test() ->>> test.get("http://genenetwork.org") -title: GeneNetwork - -Choose the type ->>> test.click_option('''//*[@id="tissue"]''', 'Liver mRNA') -clicked: Liver mRNA - -Enter the Get Any ->>> test.enter_text('''//*[@id="tfor"]''', 'grin2b') -text: grin2b - -Search ->>> test.click('//*[@id="btsearch"]') -clicked: Search - -Choose the second result ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[3]/td[2]/a''') -clicked: 1431700_at_A - -A new window is created, so we switch to it ->>> test.switch_window() -title: GSE16780 UCLA Hybrid MDP Liver Affy HT M430A (Sep11) RMA : 1431700_at_A: Display Trait - -Click on Mapping Tools ->>> test.click('''//*[@id="title4"]''') -clicked: Mapping Tools - -Click on Marker Regression tab ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p[8]/table/tbody/tr/td/div/ul/li[2]/a''') -clicked: Marker Regression - -Click on Compute ->>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p[8]/table/tbody/tr/td/div/div[2]/span/table/tbody/tr/td/input''') -clicked: Compute - -Another new window ->>> test.switch_window() -title: Genome Association Result - -Sleep a bunch because this can take a while ->>> sleep(60) - -Ensure that the LRS of the top record is the exepcted value ->>> test.get_text('''/html/body/table/tbody/tr[3]/td/table/tbody/tr[4]/td/table/tbody/tr/td/div/table/tbody/tr[2]/td[2]''') -text: 11.511 - -""" - -from __future__ import print_function, division, absolute_import - -from browser_test import Test - -# -#from time import sleep -# -# -#import selenium -#from selenium import webdriver -#from selenium.common.exceptions import NoSuchElementException, ElementNotVisibleException -#from selenium.webdriver.common.keys import Keys -# -# -#class Test(object): -# def __init__(self): -# self.browser = webdriver.Chrome('/home/gn2/gn2/webtests/chromedriver') -# -# def get(self, url): -# self.browser.get(url) -# sleep(5) -# self.title() -# -# def click(self, xpath_selector): -# el = self.browser.find_element_by_xpath(xpath_selector) -# text = el.text.strip() or el.get_attribute("value").strip() -# el.click() -# print("clicked:", text) -# sleep(2) -# -# def click_option(self, xpath_selector, option_text): -# el = self.browser.find_element_by_xpath(xpath_selector) -# for option in el.find_elements_by_tag_name('option'): -# if option.text == option_text: -# option.click() # select() in earlier versions of webdriver -# break -# sleep(2) -# -# def enter_text(self, xpath_selector, text): -# el = self.browser.find_element_by_xpath(xpath_selector) -# sleep(10) -# el.send_keys(text) -# sleep(5) -# # Just in case things get mangled by JavaScript, etc. we print the text for testing -# self.get_text(xpath_selector) -# -# def get_text(self, xpath_selector): -# el = self.browser.find_element_by_xpath(xpath_selector) -# text = el.text.strip() or el.get_attribute("value").strip() -# print("text:", text) -# -# def switch_window(self): -# self.browser.switch_to_window(self.browser.window_handles[-1]) -# sleep(2) -# self.title() -# sleep(2) -# -# -# def title(self): -# print("title:", self.browser.title) - - - -if __name__ == '__main__': - import doctest - doctest.testmod() |