diff options
Diffstat (limited to 'wqflask/maintenance/generate_probesetfreeze_file.py')
| -rw-r--r-- | wqflask/maintenance/generate_probesetfreeze_file.py | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/wqflask/maintenance/generate_probesetfreeze_file.py b/wqflask/maintenance/generate_probesetfreeze_file.py index f43f952b..2f917c71 100644 --- a/wqflask/maintenance/generate_probesetfreeze_file.py +++ b/wqflask/maintenance/generate_probesetfreeze_file.py @@ -12,6 +12,7 @@ from base import webqtlConfig from pprint import pformat as pf +from utility.tools import get_setting from wqflask.database import database_connection @@ -107,7 +108,7 @@ def main(): "(Oct08)_RankInv_Beta.txt") dataset_name = "Eye_AXBXA_1008_RankInv" - with database_connection as conn: + with database_connection(get_setting("SQL_URI")) as conn: with conn.cursor() as cursor: strains = get_strains(cursor) print("Getting probset_vals") |