diff options
Diffstat (limited to 'wqflask/base')
| -rwxr-xr-x | wqflask/base/data_set.py | 1 | ||||
| -rwxr-xr-x | wqflask/base/trait.py | 6 |
2 files changed, 5 insertions, 2 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index f25e7974..cd8c1ac1 100755 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -224,6 +224,7 @@ class DatasetGroup(object): """ def __init__(self, dataset): """This sets self.group and self.group_id""" + print("dataset name:", dataset.name) self.name, self.id = g.db.execute(dataset.query_for_group).fetchone() if self.name == 'BXD300': self.name = "BXD" diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index aea1f9a9..731f99eb 100755 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -387,6 +387,7 @@ class GeneralTrait(object): #trait_qtl = self.cursor.fetchone() if trait_qtl: self.locus, self.lrs, self.pvalue, self.mean = trait_qtl + print("self.locus:", self.locus) if self.locus: query = """ select Geno.Chr, Geno.Mb from Geno, Species @@ -395,8 +396,9 @@ class GeneralTrait(object): Geno.SpeciesId = Species.Id """.format(self.dataset.group.species, self.locus) result = g.db.execute(query).fetchone() - self.locus_chr = result[0] - self.locus_mb = result[1] + if result: + self.locus_chr = result[0] + self.locus_mb = result[1] else: self.locus = self.locus_chr = self.locus_mb = self.lrs = self.pvalue = self.mean = "" |