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-rwxr-xr-xwqflask/base/trait.py35
1 files changed, 0 insertions, 35 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py
index eb9bc940..ff149ba3 100755
--- a/wqflask/base/trait.py
+++ b/wqflask/base/trait.py
@@ -221,32 +221,6 @@ class GeneralTrait(object):
if samplelist == None:
samplelist = []
- #assert self.dataset
-
- #if self.cellid:
- # #Probe Data
- # query = '''
- # SELECT
- # Strain.Name, ProbeData.value, ProbeSE.error, ProbeData.Id
- # FROM
- # (ProbeData, ProbeFreeze, ProbeSetFreeze, ProbeXRef,
- # Strain, Probe, ProbeSet)
- # left join ProbeSE on
- # (ProbeSE.DataId = ProbeData.Id AND ProbeSE.StrainId = ProbeData.StrainId)
- # WHERE
- # Probe.Name = '%s' AND ProbeSet.Name = '%s' AND
- # Probe.ProbeSetId = ProbeSet.Id AND
- # ProbeXRef.ProbeId = Probe.Id AND
- # ProbeXRef.ProbeFreezeId = ProbeFreeze.Id AND
- # ProbeSetFreeze.ProbeFreezeId = ProbeFreeze.Id AND
- # ProbeSetFreeze.Name = '%s' AND
- # ProbeXRef.DataId = ProbeData.Id AND
- # ProbeData.StrainId = Strain.Id
- # Order BY
- # Strain.Name
- # ''' % (self.cellid, self.name, self.dataset.name)
- #
- #else:
results = self.dataset.retrieve_sample_data(self.name)
# Todo: is this necessary? If not remove
@@ -260,15 +234,6 @@ class GeneralTrait(object):
if not samplelist or (samplelist and name in samplelist):
self.data[name] = webqtlCaseData(*item) #name, value, variance, num_cases)
- #def keys(self):
- # return self.__dict__.keys()
- #
- #def has_key(self, key):
- # return self.__dict__.has_key(key)
- #
- #def items(self):
- # return self.__dict__.items()
-
def retrieve_info(self, get_qtl_info=False):
assert self.dataset, "Dataset doesn't exist"
if self.dataset.type == 'Publish':