diff options
Diffstat (limited to 'wqflask/base')
| -rw-r--r-- | wqflask/base/data_set.py | 7 | ||||
| -rw-r--r-- | wqflask/base/trait.py | 2 |
2 files changed, 7 insertions, 2 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index 4959457a..dbdbb51c 100644 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -169,7 +169,7 @@ def mescape(*items): class Markers(object): """Todo: Build in cacheing so it saves us reading the same file more than once""" def __init__(self, name): - json_data_fh = open(locate(name + '.json','genotype/json')) + json_data_fh = open(locate(name + ".json",'genotype/json')) try: markers = json.load(json_data_fh) except: @@ -334,7 +334,10 @@ class DatasetGroup(object): else: marker_class = Markers - self.markers = marker_class(self.name) + if self.genofile: + self.markers = marker_class(self.genofile[:-5]) + else: + self.markers = marker_class(self.name) def get_f1_parent_strains(self): try: diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index e22a51e4..33a4efe9 100644 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -206,6 +206,8 @@ class GeneralTrait(object): formatted = self.description if self.probe_target_description: formatted += "; " + self.probe_target_description + else: + formatted = "Not available" elif self.dataset.type == 'Publish': if self.confidential: formatted = self.pre_publication_description |