diff options
Diffstat (limited to 'wqflask/base')
| -rw-r--r-- | wqflask/base/trait.py | 9 |
1 files changed, 3 insertions, 6 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index de03273d..d0c79119 100644 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -627,14 +627,11 @@ def retrieve_trait_info(trait, dataset, get_qtl_info=False): trait.locus = trait.locus_chr = trait.locus_mb = trait.additive = "" else: trait.locus = trait.lrs = trait.additive = "" - - if (dataset.type == 'Publish' or dataset.type == "ProbeSet") and trait.locus_chr != "" and trait.locus_mb != "": - trait.LRS_location_repr = LRS_location_repr = 'Chr%s: %.6f' % ( - trait.locus_chr, float(trait.locus_mb)) - if trait.lrs != "": + if (dataset.type == 'Publish' or dataset.type == "ProbeSet") and str(trait.locus_chr or "") != "" and str(trait.locus_mb or "") != "": + trait.LRS_location_repr = LRS_location_repr = 'Chr%s: %.6f' % (trait.locus_chr, float(trait.locus_mb)) + if str(trait.lrs or "") != "": trait.LRS_score_repr = LRS_score_repr = '%3.1f' % trait.lrs else: raise KeyError(repr(trait.name) + ' information is not found in the database.') - return trait |