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-rwxr-xr-xwqflask/base/data_set.py3
1 files changed, 2 insertions, 1 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index e37a838f..0e5a3ac1 100755
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -405,10 +405,11 @@ class DatasetGroup(object):
#print("Cache not hit")
from utility.tools import plink_command
- PLINK_PATH,PLINK_COMMAND = plink_command()
+ PLINK_RUN = plink_command()
geno_file_path = webqtlConfig.GENODIR+self.name+".geno"
plink_file_path = PLINK_PATH+"/"+self.name+".fam"
+ # @FIXME PJOTR/ZACH: .fam files should go into FLATFILES
if os.path.isfile(plink_file_path):
self.samplelist = get_group_samplelists.get_samplelist("plink", plink_file_path)