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path: root/wqflask/base/webqtlDataset.py
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Diffstat (limited to 'wqflask/base/webqtlDataset.py')
-rwxr-xr-xwqflask/base/webqtlDataset.py28
1 files changed, 15 insertions, 13 deletions
diff --git a/wqflask/base/webqtlDataset.py b/wqflask/base/webqtlDataset.py
index 4f98e90c..933077fd 100755
--- a/wqflask/base/webqtlDataset.py
+++ b/wqflask/base/webqtlDataset.py
@@ -34,6 +34,7 @@ class webqtlDataset:
"""
Dataset class defines a dataset in webqtl, can be either Microarray,
Published phenotype, genotype, or user input dataset(temp)
+
"""
def __init__(self, dbName, cursor=None):
@@ -42,7 +43,7 @@ class webqtlDataset:
self.id = 0
self.name = ''
self.type = ''
- self.riset = ''
+ self.group = ''
self.cursor = cursor
#temporary storage
@@ -81,14 +82,15 @@ class webqtlDataset:
self.name = dbName
if self.cursor and self.id == 0:
self.retrieveName()
-
- def __str__(self):
- return self.name
-
- __repr__ = __str__
+
+
+ # Delete this eventually
+ @property
+ def riset():
+ Weve_Renamed_This_As_Group
- def getRISet(self):
+ def get_group(self):
assert self.cursor
if self.type == 'Publish':
query = '''
@@ -124,12 +126,12 @@ class webqtlDataset:
else:
return ""
self.cursor.execute(query)
- RISet, RIID = self.cursor.fetchone()
- if RISet == 'BXD300':
- RISet = "BXD"
- self.riset = RISet
- self.risetid = RIID
- return RISet
+ group, RIID = self.cursor.fetchone()
+ if group == 'BXD300':
+ group = "BXD"
+ self.group = group
+ self.group_id = RIID
+ return group
def retrieveName(self):