diff options
Diffstat (limited to 'wqflask/base/trait.py')
| -rwxr-xr-x | wqflask/base/trait.py | 5 |
1 files changed, 1 insertions, 4 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index c893c887..6a64eeaf 100755 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -286,7 +286,6 @@ class GeneralTrait(object): escape(self.dataset.name), escape(self.name)) trait_info = g.db.execute(query).fetchone() - #print("trait_info is: ", pf(trait_info)) #XZ, 05/08/2009: We also should use Geno.Id to find marker instead of just using Geno.Name # to avoid the problem of same marker name from different species. elif self.dataset.type == 'Geno': @@ -359,7 +358,6 @@ class GeneralTrait(object): InbredSet.SpeciesId = Species.Id AND Species.TaxonomyId = Homologene.TaxonomyId """ % (escape(str(self.geneid)), escape(self.dataset.group.name)) - print("-> query is:", query) result = g.db.execute(query).fetchone() #else: # result = None @@ -391,7 +389,6 @@ class GeneralTrait(object): Geno.Name = '{}' and Geno.SpeciesId = Species.Id """.format(self.dataset.group.species, self.locus) - print("query is:", query) result = g.db.execute(query).fetchone() self.locus_chr = result[0] self.locus_mb = result[1] @@ -603,4 +600,4 @@ class GeneralTrait(object): else: ZValue = 0.5*log((1.0+self.correlation)/(1.0-self.correlation)) ZValue = ZValue*sqrt(self.overlap-3) - self.p_value = 2.0*(1.0 - reaper.normp(abs(ZValue)))
\ No newline at end of file + self.p_value = 2.0*(1.0 - reaper.normp(abs(ZValue))) |