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-rwxr-xr-xwqflask/base/trait.py5
1 files changed, 1 insertions, 4 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py
index c893c887..6a64eeaf 100755
--- a/wqflask/base/trait.py
+++ b/wqflask/base/trait.py
@@ -286,7 +286,6 @@ class GeneralTrait(object):
escape(self.dataset.name),
escape(self.name))
trait_info = g.db.execute(query).fetchone()
- #print("trait_info is: ", pf(trait_info))
#XZ, 05/08/2009: We also should use Geno.Id to find marker instead of just using Geno.Name
# to avoid the problem of same marker name from different species.
elif self.dataset.type == 'Geno':
@@ -359,7 +358,6 @@ class GeneralTrait(object):
InbredSet.SpeciesId = Species.Id AND
Species.TaxonomyId = Homologene.TaxonomyId
""" % (escape(str(self.geneid)), escape(self.dataset.group.name))
- print("-> query is:", query)
result = g.db.execute(query).fetchone()
#else:
# result = None
@@ -391,7 +389,6 @@ class GeneralTrait(object):
Geno.Name = '{}' and
Geno.SpeciesId = Species.Id
""".format(self.dataset.group.species, self.locus)
- print("query is:", query)
result = g.db.execute(query).fetchone()
self.locus_chr = result[0]
self.locus_mb = result[1]
@@ -603,4 +600,4 @@ class GeneralTrait(object):
else:
ZValue = 0.5*log((1.0+self.correlation)/(1.0-self.correlation))
ZValue = ZValue*sqrt(self.overlap-3)
- self.p_value = 2.0*(1.0 - reaper.normp(abs(ZValue))) \ No newline at end of file
+ self.p_value = 2.0*(1.0 - reaper.normp(abs(ZValue)))