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-rw-r--r--wqflask/base/data_set/__init__.py2
-rw-r--r--wqflask/base/data_set/datasetgroup.py3
2 files changed, 3 insertions, 2 deletions
diff --git a/wqflask/base/data_set/__init__.py b/wqflask/base/data_set/__init__.py
index ad51e47e..c2c0aef1 100644
--- a/wqflask/base/data_set/__init__.py
+++ b/wqflask/base/data_set/__init__.py
@@ -115,7 +115,7 @@ def datasets(group_name, this_group=None, redis_conn=Redis()):
dataset_menu.append(dict(tissue=tissue_name,
datasets=[(dataset, dataset_short)]))
- if get_setting_bool("USE_REDIS"):
+ if get_setting_bool(app, "USE_REDIS"):
redis_conn.set(key, pickle.dumps(dataset_menu, pickle.HIGHEST_PROTOCOL))
redis_conn.expire(key, 60 * 5)
diff --git a/wqflask/base/data_set/datasetgroup.py b/wqflask/base/data_set/datasetgroup.py
index 90c59a1e..a44cf18d 100644
--- a/wqflask/base/data_set/datasetgroup.py
+++ b/wqflask/base/data_set/datasetgroup.py
@@ -15,6 +15,7 @@ from wqflask.database import database_connection
from utility.configuration import (
locate,
flat_files,
+ get_setting,
flat_file_exists,
get_setting_bool,
locate_ignore_error)
@@ -128,7 +129,7 @@ class DatasetGroup:
return study_samples
def get_genofiles(self):
- jsonfile = "%s/%s.json" % (webqtlConfig.GENODIR, self.name)
+ jsonfile = "%s/%s.json" % (get_setting(app, "WEBQTL_GENODIR"), self.name)
try:
f = open(jsonfile)
except: