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-rwxr-xr-xweb/webqtl/misc/__init__.py0
-rwxr-xr-xweb/webqtl/misc/editHtmlPage.py129
-rwxr-xr-xweb/webqtl/misc/uploadFilePage.py137
3 files changed, 0 insertions, 266 deletions
diff --git a/web/webqtl/misc/__init__.py b/web/webqtl/misc/__init__.py
deleted file mode 100755
index e69de29b..00000000
--- a/web/webqtl/misc/__init__.py
+++ /dev/null
diff --git a/web/webqtl/misc/editHtmlPage.py b/web/webqtl/misc/editHtmlPage.py
deleted file mode 100755
index 68595b83..00000000
--- a/web/webqtl/misc/editHtmlPage.py
+++ /dev/null
@@ -1,129 +0,0 @@
-# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU Affero General Public License
-# as published by the Free Software Foundation, either version 3 of the
-# License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-# See the GNU Affero General Public License for more details.
-#
-# This program is available from Source Forge: at GeneNetwork Project
-# (sourceforge.net/projects/genenetwork/).
-#
-# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
-# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
-#
-#
-#
-# This module is used by GeneNetwork project (www.genenetwork.org)
-#
-# Created by GeneNetwork Core Team 2010/08/10
-#
-# Last updated by GeneNetwork Core Team 2010/10/20
-
-import string
-import os
-import urlparse
-
-from htmlgen import HTMLgen2 as HT
-
-from base.templatePage import templatePage
-from base import webqtlConfig
-from utility import webqtlUtil
-
-
-#########################################
-# Edit HTML Page
-#########################################
-
-class editHtmlPage(templatePage):
- htmlPath = webqtlConfig.ChangableHtmlPath
-
- def __init__(self, fd):
-
- templatePage.__init__(self, fd)
-
- self.templateInclude = 1
- self.dict['title'] = "Editing HTML"
-
- if not self.updMysql():
- return
-
- if webqtlConfig.USERDICT[self.privilege] >= webqtlConfig.USERDICT['user']:
- pass
- else:
- heading = "Editing HTML"
- detail = ["You don't have the permission to modify this file"]
- self.error(heading=heading,detail=detail,error="Error")
- return
-
- path = fd.formdata.getvalue('path')
- preview = fd.formdata.getvalue('preview')
- newHtmlCode = fd.formdata.getvalue('htmlSrc')
- if newHtmlCode:
- #newHtmlCode = string.replace(newHtmlCode, "&image", "&image")
- newHtmlCode = string.replace(newHtmlCode,"&", "&")
- if path and preview:
- #preview
- self.templateInclude = 0
- #print newHtmlCode
- self.debug = newHtmlCode
- elif path:
- #edit result
- fileName = self.htmlPath + path
- newfileName = fileName +'.old'
- os.system("/bin/cp -f %s %s" % (fileName, newfileName))
- fp = open(fileName, 'wb')
- fp.write(newHtmlCode)
- fp.close()
- #print "chown qyh %s" % fileName
- TD_LR = HT.TD(valign="top",colspan=2,bgcolor="#eeeeee", height=200)
- mainTitle = HT.Paragraph("Edit HTML", Class="title")
- url = HT.Href(text = "page", url =path, Class = "normal")
- intro = HT.Blockquote("This ",url, " has been succesfully modified. ")
- TD_LR.append(mainTitle, intro)
- self.dict['body'] = TD_LR
- #elif os.environ.has_key('HTTP_REFERER'):
- elif fd.refURL:
- #retrieve file to be edited
- #refURL = os.environ['HTTP_REFERER']
- addressing_scheme, network_location, path, parameters, query, fragment_identifier = urlparse.urlparse(fd.refURL)
- if path[-1] == "/":
- path += 'index.html'
-
- fileName = self.htmlPath + path
- try:
- fp = open(fileName,'rb')
- except:
- fp = open(os.path.join(self.htmlPath, 'temp.html'),'rb')
- htmlCode = fp.read()
- #htmlCode = string.replace(htmlCode, "&nbsp","&nbsp")
- htmlCode = string.replace(htmlCode, "&","&")
- fp.close()
- form = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), name='editHtml',submit=HT.Input(type='hidden'))
- inputBox = HT.Textarea(name='htmlSrc', cols="100", rows=30,text=htmlCode)
-
- hddn = {'FormID':'editHtml', 'path':path, 'preview':''}
- for key in hddn.keys():
- form.append(HT.Input(name=key, value=hddn[key], type='hidden'))
- previewButton = HT.Input(type='button',name='previewhtml', value='Preview',Class="button", onClick= "editHTML(this.form, 'preview');")
- submitButton = HT.Input(type='button',name='submitchange', value='Submit Change',Class="button", onClick= "editHTML(this.form, 'submit');")
- resetButton = HT.Input(type='reset',Class="button")
- form.append(HT.Center(inputBox, HT.P(), previewButton, submitButton, resetButton))
-
- TD_LR = HT.TD(valign="top",colspan=2,bgcolor="#eeeeee")
- mainTitle = HT.Paragraph("Edit HTML", Class="title")
- intro = HT.Blockquote("You may edit the HTML source code in the editbox below, or you can copy the content of the editbox to your favorite HTML editor. ")
- imgUpload = HT.Href(url="javascript:openNewWin('/upload.html', 'menubar=0,toolbar=0,location=0,resizable=0,status=1,scrollbars=1,height=400, width=600');", text="here", Class="fs14")
- intro2 = HT.Blockquote("Click ", imgUpload, " to upload Images. ")
- TD_LR.append(mainTitle, intro, intro2, HT.Center(form))
- self.dict['body'] = TD_LR
- else:
- heading = "Editing HTML"
- detail = ["Error occured while trying to edit the html file."]
- self.error(heading=heading,detail=detail,error="Error")
- return
-
diff --git a/web/webqtl/misc/uploadFilePage.py b/web/webqtl/misc/uploadFilePage.py
deleted file mode 100755
index da679910..00000000
--- a/web/webqtl/misc/uploadFilePage.py
+++ /dev/null
@@ -1,137 +0,0 @@
-# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU Affero General Public License
-# as published by the Free Software Foundation, either version 3 of the
-# License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-# See the GNU Affero General Public License for more details.
-#
-# This program is available from Source Forge: at GeneNetwork Project
-# (sourceforge.net/projects/genenetwork/).
-#
-# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
-# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
-#
-#
-#
-# This module is used by GeneNetwork project (www.genenetwork.org)
-#
-# Created by GeneNetwork Core Team 2010/08/10
-#
-# Last updated by GeneNetwork Core Team 2010/10/20
-
-import os
-import string
-
-from htmlgen import HTMLgen2 as HT
-
-from base.templatePage import templatePage
-from base import webqtlConfig
-from utility import webqtlUtil
-
-#########################################
-# Upload File Page
-#########################################
-
-class uploadFilePage(templatePage):
-
- uploadPath = webqtlConfig.UPLOADPATH
-
- def __init__(self, fd, formdata, cookies):
-
- templatePage.__init__(self, fd)
-
- if not self.openMysql():
- return
-
- if webqtlConfig.USERDICT[self.privilege] >= webqtlConfig.USERDICT['user']:
- pass
- else:
- heading = "Upload File"
- detail = ["You don't have the permission to upload file to the server."]
- self.error(heading=heading,detail=detail)
- return
-
- self.cursor.close()
-
- file1 = self.save_uploaded_file (formdata, 'imgName1')
- file2 = self.save_uploaded_file (formdata, 'imgName2')
- file3 = self.save_uploaded_file (formdata, 'imgName3')
- file4 = self.save_uploaded_file (formdata, 'imgName4')
- file5 = self.save_uploaded_file (formdata, 'imgName5')
-
- i = 0
- uploaded = []
-
- for filename in (file1, file2, file3, file4, file5):
- if filename:
- i += 1
- uploaded.append(filename)
-
- if i == 0:
- heading = "Upload File"
- detail = ["No file was selected, no file uploaded."]
- self.error(heading=heading,detail=detail)
- return
- else:
- TD_LR = HT.TD(height=200,width="100%",bgColor='#eeeeee')
-
- imgTbl = HT.TableLite(border=0, width = "90%",cellspacing=2, cellpadding=2, align="Center")
- imgTbl.append(HT.TR(HT.TD("Thumbnail", width="%30", align='center',Class="colorBlue"),
- HT.TD("URL", width="%60",Class="colorBlue", align='center')))
- for item in uploaded:
- img = HT.Image("/images/upload/" + item, border = 0, width=80)
-
- #url = "%s/images/upload/" % webqtlConfig.PORTADDR + item
- #url = HT.Href(text=url, url = url, Class='normalsize', target="_blank")
- url2 = "/images/upload/" + item
- url2 = HT.Href(text=url2, url = url2, Class='normalsize', target="_blank")
- imgTbl.append(HT.TR(HT.TD(img, width="%30", align='center',Class="colorWhite"),
- #HT.TD(url, HT.BR(), 'OR', HT.BR(), url2, width="%60",Class="colorWhite", align='center')))
- HT.TD(url2, width="%60",Class="colorWhite", align='center')))
-
- intro = HT.Paragraph('A total of %d files are uploaded' % i)
- TD_LR.append( HT.Center(intro) )
-
- TD_LR.append( imgTbl )
-
- self.dict['body'] = str(TD_LR)
-
- def save_uploaded_file(self, form, form_field, upload_dir=""):
- if not upload_dir:
- upload_dir = self.uploadPath
- if not form.has_key(form_field):
- return None
- fileitem = form[form_field]
-
- if not fileitem.filename or not fileitem.file:
- return None
-
- seqs = [""] + range(200)
- try:
- newfileName = string.split(fileitem.filename, ".")
- for seq in seqs:
- newfileName2 = newfileName[:]
- if seq != "":
- newfileName2[-2] = "%s-%s" % (newfileName2[-2], seq)
- fileExist = glob.glob(os.path.join(upload_dir, string.join(newfileName2, ".")))
- if not fileExist:
- break
- except:
- pass
-
- newfileName = string.join(newfileName2, ".")
- #print [newfileName, os.path.join(upload_dir, newfileName)]
- #return
-
- fout = file (os.path.join(upload_dir, newfileName), 'wb')
- while 1:
- chunk = fileitem.file.read(100000)
- if not chunk: break
- fout.write (chunk)
- fout.close()
- return newfileName
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-24 08:59:28 +0000