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-rwxr-xr-xweb/webqtl/base/webqtlConfigLocal.py10
-rw-r--r--web/webqtl/base/webqtlTrait.py9
2 files changed, 14 insertions, 5 deletions
diff --git a/web/webqtl/base/webqtlConfigLocal.py b/web/webqtl/base/webqtlConfigLocal.py
index dc86bb10..1f986aa7 100755
--- a/web/webqtl/base/webqtlConfigLocal.py
+++ b/web/webqtl/base/webqtlConfigLocal.py
@@ -3,15 +3,15 @@
#########################################
MYSQL_SERVER = 'localhost'
-DB_NAME = 'db_webqtl'
-DB_USER = 'webqtl'
+DB_NAME = 'db_webqtl_zas1024'
+DB_USER = 'webqtlupd'
DB_PASSWD = 'webqtl'
MYSQL_UPDSERVER = 'localhost'
-DB_UPDNAME = 'db_webqtl'
-DB_UPDUSER = 'webqtl'
+DB_UPDNAME = 'db_webqtl_zas1024'
+DB_UPDUSER = 'webqtlupd'
DB_UPDPASSWD = 'webqtl'
-GNROOT = '/gnshare/gn/'
+GNROOT = '/home/zas1024/gn/'
PythonPath = '/usr/bin/python'
PIDDLE_FONT_PATH = '/usr/lib/python2.4/site-packages/piddle/truetypefonts/'
diff --git a/web/webqtl/base/webqtlTrait.py b/web/webqtl/base/webqtlTrait.py
index f5051e45..2469504f 100644
--- a/web/webqtl/base/webqtlTrait.py
+++ b/web/webqtl/base/webqtlTrait.py
@@ -9,6 +9,10 @@ from dbFunction import webqtlDatabaseFunction
from utility import webqtlUtil
+from __future__ import print_function, division
+
+from pprint import pformat as pf
+
class webqtlTrait:
"""
Trait class defines a trait in webqtl, can be either Microarray,
@@ -215,6 +219,9 @@ class webqtlTrait:
def retrieveData(self, strainlist=[]):
assert self.db and self.cursor
+ debug_file = open("/home/zas1024/gn/web/traitlist_debug.txt", "w")
+ debug_file.write("strianlist is:" + strainlist + "\n")
+
if self.db.type == 'Temp':
query = '''
SELECT
@@ -341,6 +348,8 @@ class webqtlTrait:
#end if
else:
pass
+
+ debug_file.write("self.data is:", pf(self.data) + "\n")
def keys(self):
return self.__dict__.keys()