diff options
Diffstat (limited to 'web/webqtl/base')
| -rwxr-xr-x | web/webqtl/base/webqtlConfigLocal.py | 10 | ||||
| -rw-r--r-- | web/webqtl/base/webqtlTrait.py | 9 |
2 files changed, 14 insertions, 5 deletions
diff --git a/web/webqtl/base/webqtlConfigLocal.py b/web/webqtl/base/webqtlConfigLocal.py index dc86bb10..1f986aa7 100755 --- a/web/webqtl/base/webqtlConfigLocal.py +++ b/web/webqtl/base/webqtlConfigLocal.py @@ -3,15 +3,15 @@ ######################################### MYSQL_SERVER = 'localhost' -DB_NAME = 'db_webqtl' -DB_USER = 'webqtl' +DB_NAME = 'db_webqtl_zas1024' +DB_USER = 'webqtlupd' DB_PASSWD = 'webqtl' MYSQL_UPDSERVER = 'localhost' -DB_UPDNAME = 'db_webqtl' -DB_UPDUSER = 'webqtl' +DB_UPDNAME = 'db_webqtl_zas1024' +DB_UPDUSER = 'webqtlupd' DB_UPDPASSWD = 'webqtl' -GNROOT = '/gnshare/gn/' +GNROOT = '/home/zas1024/gn/' PythonPath = '/usr/bin/python' PIDDLE_FONT_PATH = '/usr/lib/python2.4/site-packages/piddle/truetypefonts/' diff --git a/web/webqtl/base/webqtlTrait.py b/web/webqtl/base/webqtlTrait.py index f5051e45..2469504f 100644 --- a/web/webqtl/base/webqtlTrait.py +++ b/web/webqtl/base/webqtlTrait.py @@ -9,6 +9,10 @@ from dbFunction import webqtlDatabaseFunction from utility import webqtlUtil +from __future__ import print_function, division + +from pprint import pformat as pf + class webqtlTrait: """ Trait class defines a trait in webqtl, can be either Microarray, @@ -215,6 +219,9 @@ class webqtlTrait: def retrieveData(self, strainlist=[]): assert self.db and self.cursor + debug_file = open("/home/zas1024/gn/web/traitlist_debug.txt", "w") + debug_file.write("strianlist is:" + strainlist + "\n") + if self.db.type == 'Temp': query = ''' SELECT @@ -341,6 +348,8 @@ class webqtlTrait: #end if else: pass + + debug_file.write("self.data is:", pf(self.data) + "\n") def keys(self): return self.__dict__.keys() |