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Diffstat (limited to 'web/webqtl/base/admin.py')
-rwxr-xr-x | web/webqtl/base/admin.py | 88 |
1 files changed, 0 insertions, 88 deletions
diff --git a/web/webqtl/base/admin.py b/web/webqtl/base/admin.py deleted file mode 100755 index a04df2da..00000000 --- a/web/webqtl/base/admin.py +++ /dev/null @@ -1,88 +0,0 @@ -# Copyright (C) University of Tennessee Health Science Center, Memphis, TN. -# -# This program is free software: you can redistribute it and/or modify it -# under the terms of the GNU Affero General Public License -# as published by the Free Software Foundation, either version 3 of the -# License, or (at your option) any later version. -# -# This program is distributed in the hope that it will be useful, -# but WITHOUT ANY WARRANTY; without even the implied warranty of -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. -# See the GNU Affero General Public License for more details. -# -# This program is available from Source Forge: at GeneNetwork Project -# (sourceforge.net/projects/genenetwork/). -# -# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010) -# at rwilliams@uthsc.edu and xzhou15@uthsc.edu -# -# -# -# This module is used by GeneNetwork project (www.genenetwork.org) -# -# Created by GeneNetwork Core Team 2010/08/10 -# -# Last updated by GeneNetwork Core Team 2010/10/20 - - - - - -#XZ, 04/02/2009: we should put this into database. - - -###LIST of databases used into gene name query - - -ADMIN_search_dbs = { - 'rat': {'PERITONEAL FAT': ['FT_2A_0605_Rz'], - 'KIDNEY': ['KI_2A_0405_Rz'], - 'ADRENAL GLAND': ['HXB_Adrenal_1208'], - 'HEART': ['HXB_Heart_1208'] - }, - 'mouse': {'CEREBELLUM': ['CB_M_0305_R'], - 'STRIATUM': ['SA_M2_0905_R', 'SA_M2_0405_RC', 'UTHSC_1107_RankInv', 'Striatum_Exon_0209'], - 'HIPPOCAMPUS': ['HC_M2_0606_R', 'UMUTAffyExon_0209_RMA'], - 'WHOLE BRAIN': ['BR_M2_1106_R', 'IBR_M_0106_R', 'BRF2_M_0805_R', 'UCLA_BHF2_BRAIN_0605'], - 'LIVER': ['LV_G_0106_B', 'UCLA_BHF2_LIVER_0605'], - 'EYE': ['Eye_M2_0908_R'], - 'HEMATOPOIETIC STEM CELLS': ['HC_U_0304_R'], - 'KIDNEY': ['MA_M2_0806_R'], - 'MAMMARY TUMORS': ['MA_M_0704_R', 'NCI_Agil_Mam_Tum_RMA_0409'], - 'PREFRONTAL CORTEX': ['VCUSal_1206_R'], - 'SPLEEN': ['IoP_SPL_RMA_0509'], - 'NUCLEUS ACCUMBENS': ['VCUSalo_1007_R'], - 'NEOCORTEX': ['HQFNeoc_0208_RankInv'], - 'ADIPOSE': ['UCLA_BHF2_ADIPOSE_0605'], - 'RETINA': ['Illum_Retina_BXD_RankInv0410'] - }, - 'human': { - 'LYMPHOBLAST B CELL': ['Human_1008', 'UT_CEPH_RankInv0909'], - 'WHOLE BRAIN': ['GSE5281_F_RMA0709', 'GSE15222_F_RI_0409'] - } - } - - -###LIST of tissue alias - -ADMIN_tissue_alias = {'CEREBELLUM': ['Cb'], - 'STRIATUM': ['Str'], - 'HIPPOCAMPUS': ['Hip'], - 'WHOLE BRAIN': ['Brn'], - 'LIVER': ['Liv'], - 'EYE': ['Eye'], - 'PERITONEAL FAT': ['Fat'], - 'HEMATOPOIETIC STEM CELLS': ['Hsc'], - 'KIDNEY': ['Kid'], - 'ADRENAL GLAND': ['Adr'], - 'HEART': ['Hea'], - 'MAMMARY TUMORS': ['Mam'], - 'PREFRONTAL CORTEX': ['Pfc'], - 'SPLEEN': ['Spl'], - 'NUCLEUS ACCUMBENS': ['Nac'], - 'NEOCORTEX': ['Ctx'], - 'ADIPOSE': ['Wfat'], - 'RETINA': ['Ret'] - } - - |