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diff --git a/web/dbdoc/UCLA_CXBF2_BRAIN_2005.html b/web/dbdoc/UCLA_CXBF2_BRAIN_2005.html new file mode 100755 index 00000000..6cdb7737 --- /dev/null +++ b/web/dbdoc/UCLA_CXBF2_BRAIN_2005.html @@ -0,0 +1,92 @@ +<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN"> +<HTML><HEAD><TITLE>UCLA CXBF2 Brain (2005) mlratio</TITLE> +<META http-equiv=Content-Type content="text/html; charset=iso-8859-1"> + +<LINK REL="stylesheet" TYPE="text/css" HREF='/css/general.css'> +<LINK REL="stylesheet" TYPE="text/css" HREF='/css/menu.css'> +<SCRIPT SRC="/javascript/webqtl.js"></SCRIPT> + +<SCRIPT SRC="/javascript/dhtml.js"></SCRIPT> + + +</HEAD> +<BODY bottommargin="2" leftmargin="2" rightmargin="2" topmargin="2" text=#000000 bgColor=#ffffff > + +<TABLE cellSpacing=5 cellPadding=4 width="100%" border=0> + <TBODY> + <TR> + <script language="JavaScript" src="/javascript/header.js"></script> + </TR> + <TR> + <TD bgColor=#eeeeee class="solidBorder"> + <Table width= "100%" cellSpacing=0 cellPadding=5> + <TR> + + <!-- split from Here --> + <!-- Body Start from Here --> + <P class="title">UCLA CAST/Ei X C57BL/6J reciprocal F2 Intercross Brain (2005) mlratio<A HREF="/webqtl/main.py?FormID=editHtml"> + <img src="/images/modify.gif" alt="modify this page" border= 0 valign="middle"></A></P> + +<P>SUMMARY: One of a set of four large expression data set (brain, peritoneal fat, liver, and quadriceps muscle) by Alfons Jake Lusis and colleagues (UCLA) generated using two large reciprocal F2 intercrosses between CAST/EiJ and C57BL/6J. The data are given as mean log ratios. These values are essentially expression offsets for each individual with respect to the group mean. + +<P>Breeding and tissue dissection was performed at UCLA by AJL and colleagues. + +<P>The brain in this case consists of the olfactory bulbs, the whole forebrain and midbrain, the cerebellum, and hindbrain. Data are provided for 401 animals, roughly the same number of reciprocal BCF2 and CBF2 progeny. + +<P>RNA extraction, expression profiling, genotyping, and initial data transformation and normalization were carried out by Eric Schadt and colleagues at Rosetta/Merck. + +<P>A custom Agilent array consisting of 23,272 60-mer probes was used in this study. The same array was also used in a study of the same four tissues in a large BHF2 intercross (also included in GeneNetwork). + +<P>Data entered by Evan Williams (July 24, 2008). + +<P>These unapproved notes by RWW, July 25, 2008. + + + + + </TR></TABLE> + </TD> + </TR> + <TR> + <TD align=center bgColor=#ddddff class="solidBorder"> + <!--Start of footer--> + <TABLE width="90%"> + <script language='JavaScript' src='/javascript/footer.js'></script> + <TR> + <TD colspan=3 class="fs12"> + <UL> + + </UL> + </TD> + </TR> + </TABLE> + <!--End of footer--> + </TD> + </TR> +</TABLE> +<!-- /Footer --> +<!-- menu script itself. you should not modify this file --> +<script language="JavaScript" src="/javascript/menu_new.js"></script> +<!-- items structure. menu hierarchy and links are stored there --> +<script language="JavaScript" src="/javascript/menu_items.js"></script> +<!-- files with geometry and styles structures --> +<script language="JavaScript" src="/javascript/menu_tpl.js"></script> +<script language="JavaScript"> + <!--// + // Note where menu initialization block is located in HTML document. + // Don't try to position menu locating menu initialization block in + // some table cell or other HTML element. Always put it before </body> + // each menu gets two parameters (see demo files) + // 1. items structure + // 2. geometry structure + new menu (MENU_ITEMS, MENU_POS); + // make sure files containing definitions for these variables are linked to the document + // if you got some javascript error like "MENU_POS is not defined", then you've made syntax + // error in menu_tpl.js file or that file isn't linked properly. + + // also take a look at stylesheets loaded in header in order to set styles + //--> + +</script> +</BODY> +</HTML> |