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Diffstat (limited to 'misc/notes.txt')
| -rw-r--r-- | misc/notes.txt | 30 |
1 files changed, 28 insertions, 2 deletions
diff --git a/misc/notes.txt b/misc/notes.txt index 2ae9710b..ab71a99f 100644 --- a/misc/notes.txt +++ b/misc/notes.txt @@ -4,14 +4,21 @@ git clone http://github.com/zsloan/genenetwork.git gene Pull from branch in git repository: git pull origin flask(or whatever the branch is) +**"apt-cache search" searches for text in the description for various packages, while +"apt-file search" searches for files within the packages** + +Search for package with a specified file that can be installed with apt-get +apt-file search _______ + To fix error "mysql_config not found": sudo apt-get install libmysqlclient-dev +Create requirements.txt file: +pip freeze > requirements.txt (or whatever filename) + Install from requirements.txt: pip install -r gene/wqflask/requirements.txt -t ve27 - - ============================================ To get server running: @@ -97,6 +104,25 @@ kill (process #) =========================================== +Installing QTL Reaper + +wget http://downloads.sourceforge.net/project/qtlreaper/qtlreaper/1.1.1/qtlreaper-1.1.1.tar.gz?r=http%3A%2F%2Fsourceforge.net%2Fprojects%2Fqtlreaper%2Ffiles%2Flatest%2Fdownload&ts=1358975786&use_mirror=iweb +tar xvf qtlreaper-1.1.1.tar.gz (to unzip) +python setup.py build +python setup.py install + +=========================================== + +Using Yolk + +Check packages installed in this virtual environment: +yolk -l + +Checks packages that have updates available: +yolk -U + +=========================================== + Python stuff: Classes should always inherit "object" |