diff options
Diffstat (limited to 'etc/default_settings.py')
| -rw-r--r-- | etc/default_settings.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/etc/default_settings.py b/etc/default_settings.py index a16ac3ad..75f84dc4 100644 --- a/etc/default_settings.py +++ b/etc/default_settings.py @@ -91,5 +91,5 @@ JS_GN_PATH = os.environ['HOME']+"/genenetwork/javascript" # ---- GN2 Executables (overwrite for testing only) # PLINK_COMMAND = str.strip(os.popen("which plink2").read()) # GEMMA_COMMAND = str.strip(os.popen("which gemma").read()) -REAPER_COMMAND = HOME + "/gn2-zach/rust-qtlreaper/target/release/qtlreaper" +REAPER_COMMAND = os.environ['GN2_PROFILE'] + "/bin/qtlreaper" # GEMMA_WRAPPER_COMMAND = str.strip(os.popen("which gemma-wrapper").read()) |