diff options
Diffstat (limited to 'doc/docker-container.org')
| -rw-r--r-- | doc/docker-container.org | 15 |
1 files changed, 4 insertions, 11 deletions
diff --git a/doc/docker-container.org b/doc/docker-container.org index ec91824a..79b8272f 100644 --- a/doc/docker-container.org +++ b/doc/docker-container.org @@ -28,17 +28,10 @@ which will be added to a base mariaDB image. First create the gn2 tar archive by running: #+begin_src sh -# For the Python 2 version: env GUIX_PACKAGE_PATH="/home/bonface/projects/guix-bioinformatics:/home/bonface/projects/guix-past/modules" \ ./pre-inst-env guix pack --no-grafts\ -S /gn2-profile=/ \ screen genenetwork2 - -# For the Python 3 version: -env GUIX_PACKAGE_PATH="/home/bonface/projects/guix-bioinformatics:/home/bonface/projects/guix-past/modules" \ - ./pre-inst-env guix pack --no-grafts\ - -S /gn2-profile=/ \ - screen python3-genenetwork2 #+end_src The output will look something similar to: @@ -59,16 +52,16 @@ RUN tar -xzf /tmp/gn2.tar.gz -C / && rm -f /tmp/gn2.tar.gz && \ Build the image(Note the fullstop at the end): -: sudo docker build -t python2-genenetwork2:latest -f Dockerfile . +: sudo docker build -t genenetwork2:latest -f Dockerfile . To load the image interactively you've just created: -: docker run -ti "python2-genenetwork2:latest" bash +: docker run -ti "genenetwork2:latest" bash Assuming you have a docker instance running, you could always run commands in it e.g: -: docker run "python2-genenetwork2:latest" python --version +: docker run "genenetwork2:latest" python --version * Pushing to DockerHub @@ -78,7 +71,7 @@ CI environment using Github Actions. To push to dockerhub, first get the image name by running =docker images=. Push to dockerhub using a command similar to: -: docker push bonfacekilz/python2-genenetwork2:latest +: docker push bonfacekilz/genenetwork2:latest Right now, we have 2 images on DockerHub: |