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Diffstat (limited to 'doc/README.org')
| -rw-r--r-- | doc/README.org | 15 |
1 files changed, 10 insertions, 5 deletions
diff --git a/doc/README.org b/doc/README.org index 7b410305..fc64983e 100644 --- a/doc/README.org +++ b/doc/README.org @@ -9,6 +9,7 @@ - [[#step-3-authorize-the-gn-guix-server][Step 3: Authorize the GN Guix server]] - [[#step-4-install-and-run-gn2-][Step 4: Install and run GN2 ]] - [[#run-mysql-server][Run MySQL server]] + - [[#gn2-dependency-graph][GN2 Dependency Graph]] - [[#source-deployment][Source deployment]] - [[#run-your-own-copy-of-gn2][Run your own copy of GN2]] - [[#set-up-nginx-port-forwarding][Set up nginx port forwarding]] @@ -34,11 +35,8 @@ main Guix package tree and that of the Genenetwork package tree. Current supported versions can be found as the SHA values of 'gn-latest' branches of [[https://github.com/genenetwork/guix-bioinformatics/tree/gn-latest][Guix bioinformatics]] and [[https://github.com/genenetwork/guix/tree/gn-latest][GNU Guix main]]. -Graph of all runtime dependencies as installed by GNU Guix. - -#+ATTR_HTML: :title GN2_graph -[[http://biobeat.org/gn2.svg]] - +For a full view of runtime dependencies as defined by GNU Guix, see +the [[#gn2-dependency-graph][GN2 Dependency Graph]]. * Quick installation recipe @@ -243,6 +241,13 @@ configuration. Note for the plant database you can rename it to db_webqtl_s, or change the settings in etc/default_settings.py to match your path. +* GN2 Dependency Graph + +Graph of all runtime dependencies as installed by GNU Guix. + +#+ATTR_HTML: :title GN2_graph +[[http://biobeat.org/gn2.svg]] + * Source deployment This section gives a more elaborate instruction for installing GN2 |