diff options
Diffstat (limited to 'bin/genenetwork2')
| -rwxr-xr-x | bin/genenetwork2 | 10 |
1 files changed, 5 insertions, 5 deletions
diff --git a/bin/genenetwork2 b/bin/genenetwork2 index 6c42c21f..a03ad6ef 100755 --- a/bin/genenetwork2 +++ b/bin/genenetwork2 @@ -112,7 +112,7 @@ if [ -z "${GN2_PROFILE}" ]; then read -p "PRESS [ENTER] TO CONTINUE..." else export PATH=$GN2_PROFILE/bin:$PATH - # export PYTHONPATH="$GN2_PROFILE/lib/python3.9/site-packages" # never inject another PYTHONPATH!! + export PYTHONPATH="$GN2_PROFILE/lib/python3.10/site-packages" # never inject another PYTHONPATH!! export R_LIBS_SITE=$GN2_PROFILE/site-library export JS_GUIX_PATH=$GN2_PROFILE/share/genenetwork2/javascript export GUIX_GTK3_PATH="$GN2_PROFILE/lib/gtk-3.0" @@ -133,10 +133,10 @@ else done <<< "$PYTHONPATH" if [ ! -d "${R_LIBS_SITE}" ] ; then echo "R_LIBS_SITE not valid ${R_LIBS_SITE}" ; exit 1 ; fi fi -# if [ -z "${PYTHONPATH}" ] ; then -# echo "ERROR PYTHONPATH has not been set - use GN2_PROFILE!" -# exit 1 -# fi +if [ -z "${PYTHONPATH}" ] ; then + echo "ERROR PYTHONPATH has not been set - use GN2_PROFILE!" + exit 1 +fi if [ ! -d "${R_LIBS_SITE}" ] ; then echo "ERROR R_LIBS_SITE has not been set correctly (we only allow one path) - use GN2_PROFILE!" echo "Paste into your shell the output of (for example)" |