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-rwxr-xr-xbin/genenetwork26
1 files changed, 3 insertions, 3 deletions
diff --git a/bin/genenetwork2 b/bin/genenetwork2
index dd6db7d6..5f4e0f9a 100755
--- a/bin/genenetwork2
+++ b/bin/genenetwork2
@@ -60,7 +60,7 @@ GN2_ID=$(cat /etc/hostname):$(basename $GN2_BASE_DIR)
echo GN2_BASE_DIR=$GN2_BASE_DIR
-GUIX_SITE=$GN2_BASE_DIR/lib/python2.7/site-packages
+GUIX_SITE=$GN2_BASE_DIR/lib/python3.8/site-packages
if [ -d $GUIX_SITE ]; then
echo INFO: GN2 is running from GNU Guix
GN2_BASE_DIR=$GUIX_SITE
@@ -105,7 +105,7 @@ echo GN2_SETTINGS=$settings
# if [ -z $ELASTICSEARCH_PROFILE ]; then
# echo -e "WARNING: Elastic Search profile has not been set - use ELASTICSEARCH_PROFILE";
# else
-# PYTHONPATH="$PYTHONPATH${PYTHONPATH:+:}$ELASTICSEARCH_PROFILE/lib/python2.7/site-packages"
+# PYTHONPATH="$PYTHONPATH${PYTHONPATH:+:}$ELASTICSEARCH_PROFILE/lib/python3.8/site-packages"
# fi
if [ -z $GN2_PROFILE ] ; then
@@ -121,7 +121,7 @@ if [ -z $GN2_PROFILE ]; then
read -p "PRESS [ENTER] TO CONTINUE..."
else
export PATH=$GN2_PROFILE/bin:$PATH
- export PYTHONPATH="$PYTHON_GN_PATH:$GN2_PROFILE/lib/python2.7/site-packages" # never inject another PYTHONPATH!!
+ export PYTHONPATH="$GN2_PROFILE/lib/python3.8/site-packages" # never inject another PYTHONPATH!!
export R_LIBS_SITE=$GN2_PROFILE/site-library
export JS_GUIX_PATH=$GN2_PROFILE/share/genenetwork2/javascript
export GUIX_GTK3_PATH="$GN2_PROFILE/lib/gtk-3.0"