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@@ -1,6 +1,6 @@ -[](https://zenodo.org/badge/latestdoi/5591/genenetwork/genenetwork2) +[](https://zenodo.org/badge/latestdoi/5591/genenetwork/genenetwork2) [](http://joss.theoj.org/papers/10.21105/joss.00025) -# GENENETWORK +# GeneNetwork This repository contains the source code for the GeneNetwork (GN) server http://gn2.genenetwork.org/ (version 2 aka GN2). GN is a Web @@ -35,10 +35,12 @@ testing using [mechanize](https://github.com/genenetwork/genenetwork2/tree/maste ## Documentation User documentation can be found -[here](http://gn2.genenetwork.org/help). The database schema is -shared with GN1 and described +[here](http://gn2.genenetwork.org/help). The architecture of the +software stack is described [here](./doc/Architecture.org). The +database schema is (still) shared with GN1 and currently described [here](http://www.genenetwork.org/webqtl/main.py?FormID=schemaShowPage). Software -documentation is being expanded in the [source code repository](https://github.com/genenetwork/genenetwork2/tree/master/doc). +documentation is being expanded in the +[source code repository](https://github.com/genenetwork/genenetwork2/tree/master/doc). ## Contributing @@ -66,7 +68,12 @@ For more information visit http://www.genenetwork.org/ ## Cite -You can cite this software using +[](http://joss.theoj.org/papers/10.21105/joss.00025) + +GeneNetwork was published in the Journal of Open Source Software as 'GeneNetwork: framework for web-based genetics' by Zachary Sloan, Danny Arends, Karl W. Broman, Arthur Centeno, Nicholas Furlotte, Harm Nijveen, Lei Yan, Xiang Zhou, Robert W. WIlliams and Pjotr Prins + +You may also cite the software using + [](https://zenodo.org/badge/latestdoi/5591/genenetwork/genenetwork2). ## Contact |