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-rw-r--r--wqflask/wqflask/templates/metadata/dataset.html37
-rw-r--r--wqflask/wqflask/views.py12
2 files changed, 24 insertions, 25 deletions
diff --git a/wqflask/wqflask/templates/metadata/dataset.html b/wqflask/wqflask/templates/metadata/dataset.html
index 6bad6fda..11f450dc 100644
--- a/wqflask/wqflask/templates/metadata/dataset.html
+++ b/wqflask/wqflask/templates/metadata/dataset.html
@@ -29,16 +29,15 @@
</style>
{% endblock %}
-{% block title %}Dataset: {{ name }}{% endblock %}
-
+{% block title %}Dataset: {{ metadata.label }}{% endblock %}
{% block content %}
<header class="page-header text-justify">
<h1>
- {% if metadata.publicationTitle %}
- <u>{{ metadata.publicationTitle}}</u>
+ {% if metadata.title %}
+ <u>{{ metadata.title}}</u>
<br/>
- <small>({{ metadata.title or metadata.name}})</small>
+ <small>({{ metadata.title or metadata.label}})</small>
{% else %}
{{ name }}
{% endif %}
@@ -54,12 +53,12 @@
<div class="panel-body">
<dl class="dl-horizontal">
{% if metadata.created %} <dt>Created</dt> <dd>{{ metadata.created }}</dd> {% endif %}
- {% if metadata.datasetGroup %} <dt>Data Set Group</dt> <dd>{{ metadata.datasetGroup }}</dd> {% endif %}
- {% if metadata.accessionId %} <dt>Accession Id</dt> <dd>{{ metadata.accessionId }}</dd> {% endif %}
- {% if metadata.geoSeries %}
+ {% if metadata.InbredSetName %} <dt>Data Set Group</dt> <dd>{{ metadata.inbredSetGroup}}</dd> {% endif %}
+ {% if metadata.identifier %} <dt>Accession Id</dt> <dd>{{ metadata.identifier}}</dd> {% endif %}
+ {% if metadata.hasGeoSeriesId %}
<dt>GEO Series</dt>
<dd>
- <a href="{{ metadata.geoSeries }}" target="_blank">{{ metadata.geoSeries.split("=")[-1] }}</a>
+ <a href="{{ metadata.hasGeoSeriesId }}" target="_blank">{{ metadata.hasGeoSeriesId.split("=")[-1] }}</a>
</dd>
{% endif %}
{% if metadata.title %} <dt>Name</dt> <dd>{{ metadata.title }}</dd> {% endif %}
@@ -100,19 +99,19 @@
<div>{{ metadata.specifics}}</div>
{% endif %}
- {% if metadata.summary %}
+ {% if metadata.description %}
<h3><strong>Summary:</strong></h3>
- <div>{{ metadata.summary|safe }}</div>
+ <div>{{ metadata.description|safe }}</div>
{% endif %}
- {% if metadata.experimentDesign %}
+ {% if metadata.hasExperimentDesignInfo %}
<h3><strong>Experiment Design:</strong></h3>
- <div>{{ metadata.experimentDesign|safe }}</div>
+ <div>{{ metadata.hasExperimentDesignInfo|safe }}</div>
{% endif %}
- {% if metadata.aboutCases %}
+ {% if metadata.hasCaseInfo %}
<h3><strong>About the cases used to generate this set of data:</strong></h3>
- <div>{{ metadata.aboutCases|safe }}</div>
+ <div>{{ metadata.hasCaseInfo|safe }}</div>
{% endif %}
{% if metadata.aboutTissue %}
@@ -120,14 +119,14 @@
<div>{{ metadata.aboutTissue|safe }}</div>
{% endif %}
- {% if metadata.aboutPlatform %}
+ {% if metadata.hasPlatformInfo %}
<h3><strong>About the array platform:</strong></h3>
- <div>{{ metadata.aboutPlatform|safe }}</div>
+ <div>{{ metadata.hasPlatformInfo|safe }}</div>
{% endif %}
- {% if metadata.aboutDataProcessing %}
+ {% if metadata.hasDataProcessingInfo %}
<h3><strong>About data values and data processing:</strong></h3>
- <div>{{ metadata.aboutDataProcessing|safe }}</div>
+ <div>{{ metadata.hasDataProcessingInfo|safe }}</div>
{% endif %}
{% if metadata.notes %}
diff --git a/wqflask/wqflask/views.py b/wqflask/wqflask/views.py
index 32b7627f..8d90b673 100644
--- a/wqflask/wqflask/views.py
+++ b/wqflask/wqflask/views.py
@@ -1106,12 +1106,12 @@ def get_dataset(name):
f"/api/metadata/dataset/{name}")
).json()
float_p = ""
- if any([metadata.get("summary"),
- metadata.get("experimentDesign"),
- metadata.get("aboutCases"),
- metadata.get("aboutTissue"),
- metadata.get("aboutPlatform"),
- metadata.get("aboutDataProcesing"), metadata.get("notes")]):
+ if any([metadata.get("description"),
+ metadata.get("hasExperimentDesignInfo"),
+ metadata.get("hasCaseInfo"),
+ metadata.get("hasCaseInfo"),
+ metadata.get("hasPlatformInfo"),
+ metadata.get("hasDataProcessingInfo"), metadata.get("notes")]):
float_p = " pull-right"
return render_template(
"dataset.html",