diff options
| -rw-r--r-- | wqflask/wqflask/templates/show_trait_mapping_tools.html | 38 |
1 files changed, 13 insertions, 25 deletions
diff --git a/wqflask/wqflask/templates/show_trait_mapping_tools.html b/wqflask/wqflask/templates/show_trait_mapping_tools.html index 9c1101ca..0f293942 100644 --- a/wqflask/wqflask/templates/show_trait_mapping_tools.html +++ b/wqflask/wqflask/templates/show_trait_mapping_tools.html @@ -2,7 +2,7 @@ {% if (use_pylmm_rqtl and dataset.group.species != "human") or use_plink_gemma %} <div class="col-xs-4"> <div class="tabbable"> <!-- Only required for left/right tabs --> - + <ul class="nav nav-pills"> {% if use_pylmm_rqtl and not use_plink_gemma and dataset.group.species != "human" %} <li class="active"> @@ -32,18 +32,6 @@ {% if use_pylmm_rqtl and not use_plink_gemma and dataset.group.species != "human" %} <div class="tab-pane active" id="interval_mapping"> <div style="margin-top: 20px" class="form-horizontal"> - {% if genofiles and genofiles|length>0 %} - <div class="mapping_method_fields form-group"> - <label for="genofiles" class="col-xs-3 control-label">Geno File</label> - <div style="margin-left: 20px;" class="col-xs-4 controls"> - <select name="genofile" class="form-control"> - {% for item in genofiles %} - <option value="{{item[0]}}">{{item[1]}}</option> - {% endfor %} - </select> - </div> - </div> - {% endif %} <div class="mapping_method_fields form-group"> <label for="mapping_permutations" class="col-xs-3 control-label">Permutations</label> <div style="margin-left: 20px;" class="col-xs-4 controls"> @@ -73,7 +61,7 @@ No </label> </div> - </div> + </div> <!-- <div class="mapping_method_fields form-group"> @@ -87,7 +75,7 @@ <div class="mapping_method_fields form-group"> <label style="text-align:left;" class="col-xs-12 control-label">Display Additive Effect</label> - <div class="col-xs-12 controls" id="display_additive_effect"> + <div class="col-xs-12 controls" id="display_additive_effect"> <label class="radio-inline"> <input type="radio" name="display_additive" id="display_additive" value="yes" checked=""> Yes @@ -103,7 +91,7 @@ <div class="mapping_method_fields form-group"> <label style="text-align:left;" class="col-xs-3 control-label">Marker<br>Regression</label> - <div style="margin-left: 20px;" class="col-xs-4 controls"> + <div style="margin-left: 20px;" class="col-xs-4 controls"> <label class="radio-inline"> <input type="radio" name="manhattan_plot_reaper" value="True"> Yes @@ -158,7 +146,7 @@ <div class="mapping_method_fields form-group"> <label style="text-align:left;" class="col-xs-12 control-label">Manhattan Plot</label> - <div class="col-xs-12 controls"> + <div class="col-xs-12 controls"> <label class="radio-inline"> <input type="radio" name="manhattan_plot_pylmm" value="True"> Yes @@ -179,7 +167,7 @@ </div> </div> <div class="tab-pane" id="rqtl_geno"> - + <div style="margin-top: 20px" class="form-horizontal"> <div class="mapping_method_fields form-group"> <label for="mapping_permutations" class="col-xs-3 control-label">Permutations</label> @@ -238,7 +226,7 @@ <div class="mapping_method_fields form-group"> <label style="text-align:left;" class="col-xs-12 control-label">Pair Scan</label> - <div class="col-xs-12 controls"> + <div class="col-xs-12 controls"> <label class="radio-inline"> <input type="radio" name="pair_scan" value="true"> Yes @@ -252,7 +240,7 @@ <div class="mapping_method_fields form-group"> <label style="text-align:left;" class="col-xs-12 control-label">Manhattan Plot</label> - <div class="col-xs-12 controls"> + <div class="col-xs-12 controls"> <label class="radio-inline"> <input type="radio" name="manhattan_plot_rqtl" value="True"> Yes @@ -284,7 +272,7 @@ </div> </div> </div> - + <div class="form-group"> <label for="plink_compute" class="col-xs-1 control-label"></label> <div style="margin-left:20px;" class="col-xs-4 controls"> @@ -294,7 +282,7 @@ </div> </div> </div> - + <div class="tab-pane" id="gemma"> <div style="padding: 20px" class="form-horizontal"> <div class="mapping_method_fields form-group"> @@ -304,7 +292,7 @@ </div> </div> </div> - + <div class="form-group"> <label for="gemma_compute" class="col-xs-1 control-label"></label> <div style="margin-left:20px;" class="col-xs-4 controls"> @@ -313,12 +301,12 @@ </button> </div> </div> - </div> + </div> {% endif %} </div> </div> </div> - <div class="col-xs-6"> + <div class="col-xs-6"> <dl> <dt>Interval Mapping</dt> <dd>Interval mapping is a process in which the statistical significance of a hypothetical QTL is evaluated at regular points across a chromosome, even in the absence of explicit genotype data at those points.</dd> |