diff options
| -rw-r--r-- | wqflask/wqflask/correlation/correlation_gn3_api.py | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/wqflask/wqflask/correlation/correlation_gn3_api.py b/wqflask/wqflask/correlation/correlation_gn3_api.py index e2346840..05210d9b 100644 --- a/wqflask/wqflask/correlation/correlation_gn3_api.py +++ b/wqflask/wqflask/correlation/correlation_gn3_api.py @@ -16,7 +16,6 @@ from gn3.commands import run_sample_corr_cmd from gn3.computations.correlations import map_shared_keys_to_values from gn3.computations.correlations import compute_all_lit_correlation from gn3.computations.correlations import compute_tissue_correlation -from wqflask.correlation.rust_correlation import compute_correlation_rust from gn3.computations.correlations import fast_compute_all_sample_correlation @@ -212,6 +211,8 @@ def compute_correlation(start_vars, method="pearson", compute_all=False): if corr_type == "sample": (this_trait_data, target_dataset_data) = fetch_sample_data( start_vars, this_trait, this_dataset, target_dataset) + ## This import has to be inside the function to prevent circular imports + from wqflask.correlation.rust_correlation import compute_correlation_rust rust_correlation_results = compute_correlation_rust( start_vars, corr_type, method, corr_return_results) correlation_results = rust_correlation_results["correlation_results"] |