diff options
| -rw-r--r-- | wqflask/wqflask/marker_regression/run_mapping.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/marker_regression/run_mapping.py b/wqflask/wqflask/marker_regression/run_mapping.py index 80094057..769b9240 100644 --- a/wqflask/wqflask/marker_regression/run_mapping.py +++ b/wqflask/wqflask/marker_regression/run_mapping.py @@ -230,7 +230,7 @@ class RunMapping: self.perm_strata = get_perm_strata( self.this_trait, primary_samples, self.categorical_vars, self.samples) - self.score_type = "LOD" + self.score_type = "-logP" self.control_marker = start_vars['control_marker'] self.do_control = start_vars['do_control'] if 'mapmethod_rqtl_geno' in start_vars: |