diff options
| -rw-r--r-- | README.md | 17 |
1 files changed, 13 insertions, 4 deletions
@@ -30,7 +30,11 @@ genenetwork2 A quick example is ```sh -env GN2_PROFILE=~/opt/gn-latest SERVER_PORT=5300 GENENETWORK_FILES=~/data/gn2_data/ ./bin/genenetwork2 ./etc/default_settings.py -gunicorn-dev +env GN2_PROFILE=~/opt/gn-latest SERVER_PORT=5300 \ + GENENETWORK_FILES=~/data/gn2_data/ \ + GN_PROXY_URL="http://localhost:8080"\ + GN3_LOCAL_URL="http://localhost:8081"\ + ./bin/genenetwork2 ./etc/default_settings.py -gunicorn-dev ``` For full examples (you may need to set a number of environment @@ -59,7 +63,12 @@ We are building 'Mechanical Rob' automated testing using Python which can be run with: ```sh -env GN2_PROFILE=~/opt/gn-latest ./bin/genenetwork2 ./etc/default_settings.py -c ../test/requests/test-website.py -a http://localhost:5003 +env GN2_PROFILE=~/opt/gn-latest \ + ./bin/genenetwork2 \ + GN_PROXY_URL="http://localhost:8080" \ + GN3_LOCAL_URL="http://localhost:8081 "\ + ./etc/default_settings.py -c \ + ../test/requests/test-website.py -a http://localhost:5003 ``` The GN2_PROFILE is the Guix profile that contains all @@ -87,9 +96,9 @@ runcmd coverage html The `runcmd` and `runpython` are shell aliases defined in the following way: ```sh -alias runpython="env GN2_PROFILE=~/opt/gn-latest TMPDIR=/tmp SERVER_PORT=5004 GENENETWORK_FILES=/gnu/data/gn2_data/ ./bin/genenetwork2 +alias runpython="env GN2_PROFILE=~/opt/gn-latest TMPDIR=/tmp SERVER_PORT=5004 GENENETWORK_FILES=/gnu/data/gn2_data/ GN_PROXY_URL="http://localhost:8080" GN3_LOCAL_URL="http://localhost:8081" ./bin/genenetwork2 -alias runcmd="time env GN2_PROFILE=~/opt/gn-latest TMPDIR=//tmp SERVER_PORT=5004 GENENETWORK_FILES=/gnu/data/gn2_data/ ./bin/genenetwork2 ./etc/default_settings.py -cli" +alias runcmd="time env GN2_PROFILE=~/opt/gn-latest TMPDIR=//tmp SERVER_PORT=5004 GENENETWORK_FILES=/gnu/data/gn2_data/ GN_PROXY_URL="http://localhost:8080" GN3_LOCAL_URL="http://localhost:8081" ./bin/genenetwork2 ./etc/default_settings.py -cli" ``` Replace some of the env variables as per your use case. |