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-rw-r--r--wqflask/wqflask/my_pylmm/pyLMM/lmm.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/lmm.py b/wqflask/wqflask/my_pylmm/pyLMM/lmm.py
index 5aa27106..1fa7a895 100644
--- a/wqflask/wqflask/my_pylmm/pyLMM/lmm.py
+++ b/wqflask/wqflask/my_pylmm/pyLMM/lmm.py
@@ -334,7 +334,7 @@ def calculate_kinship_new(genotype_matrix, temp_data=None):
inds (columns) by snps (rows).
"""
G = np.apply_along_axis( genotype.normalize, axis=0, arr=genotype_matrix)
- return kinship(G.T),G
+ return kinship(G.T),G # G gets transposed, we'll turn this into an iterator (FIXME)
def calculate_kinship_old(genotype_matrix, temp_data=None):
"""