diff options
| -rw-r--r-- | wqflask/wqflask/static/new/javascript/dataset_select_menu.js | 169 | ||||
| -rw-r--r-- | wqflask/wqflask/static/new/javascript/dataset_select_menu_edit_trait.js | 253 |
2 files changed, 0 insertions, 422 deletions
diff --git a/wqflask/wqflask/static/new/javascript/dataset_select_menu.js b/wqflask/wqflask/static/new/javascript/dataset_select_menu.js deleted file mode 100644 index 9ad38102..00000000 --- a/wqflask/wqflask/static/new/javascript/dataset_select_menu.js +++ /dev/null @@ -1,169 +0,0 @@ -$(function() { - var gndata; // loaded once for all to use - process_json = function(data) { - populate_species(); - return apply_default(); - }; - $.getJSON(gn_server_url+"int/menu/main.json", - function(data) { - gndata = data; - console.log("***** GOT DATA from GN_SERVER ****"); - console.log(gndata); - populate_species(); - }).error(function() { - console.log("ERROR: GN_SERVER not responding"); - alert("ERROR: GN_SERVER internal REST API is not responding"); - }); - - var populate_species = function() { - var species_list = Object.keys(gndata.menu).map(function(species) { - var mitem = gndata.menu[species].menu - // console.log("Species menu:",species,mitem) - return [species,mitem]; - }); - redo_dropdown($('#species'), species_list); - return populate_group(); - }; - window.populate_species = populate_species; - - var populate_group = function() { - var species = $('#species').val(); - var groups = gndata.groups[species].map(function(item) { - console.log("group:",item); - return item.slice(1,3); - }) - redo_dropdown($('#group'), groups); - return populate_type(); - }; - window.populate_group = populate_group; - - var populate_type = function() { - var species = $('#species').val(); - var group = $('#group').val(); - var type_list = gndata.menu[species].types[group].map(function(item) { - return [item,item]; - }); - - redo_dropdown($('#type'), type_list); - return populate_dataset(); - }; - window.populate_type = populate_type; - - var populate_dataset = function() { - var species = $('#species').val(); - var group = $('#group').val(); - var type = $('#type').val(); - var dataset_list = gndata.datasets[species][group][type].map(function(item) { - return item.slice(1,3); - }) - - return redo_dropdown($('#dataset'), dataset_list); - }; - window.populate_dataset = populate_dataset; - - var redo_dropdown = function(dropdown, items) { - var item, _i, _len, _results; - console.log("in redo:", dropdown, items); - dropdown.empty(); - _results = []; - for (_i = 0, _len = items.length; _i < _len; _i++) { - item = items[_i]; - if (item.length > 2){ - _results.push(dropdown.append($("<option data-id=\""+item[0]+"\" />").val(item[1]).text(item[2]))); - } else { - _results.push(dropdown.append($("<option />").val(item[0]).text(item[1]))); - } - } - return _results; - }; - $('#species').change((function(_this) { - return function() { - return populate_group(); - }; - })(this)); - $('#group').change((function(_this) { - return function() { - return populate_type(); - }; - })(this)); - $('#type').change((function(_this) { - return function() { - return populate_dataset(); - }; - })(this)); - open_window = function(url, name) { - var options; - options = "menubar=1,toolbar=1,location=1,resizable=1,status=1,scrollbars=1,directories=1,width=900"; - return open(url, name, options).focus(); - }; - var group_info = function() { - var group, species, url; - species = $('#species').val(); - group = $('#group').val(); - url = "/" + species + "Cross.html#" + group; - return open_window(url, "Group Info"); - }; - $('#group_info').click(group_info); - var dataset_info = function() { - var dataset, url; - accession_id = $('#dataset option:selected').data("id"); - url = "http://genenetwork.org/webqtl/main.py?FormID=sharinginfo&GN_AccessionId=" + accession_id; - return open_window(url, "Dataset Info"); - }; - $('#dataset_info').click(dataset_info); - var make_default = function() { - var holder, item, jholder, _i, _len, _ref; - alert("The current settings are now your default.") - holder = {}; - _ref = ['species', 'group', 'type', 'dataset']; - for (_i = 0, _len = _ref.length; _i < _len; _i++) { - item = _ref[_i]; - holder[item] = $("#" + item).val(); - } - jholder = JSON.stringify(holder); - return $.cookie('search_defaults', jholder, { - expires: 365 - }); - }; - var apply_default = function() { - var defaults, item, populate_function, _i, _len, _ref, _results; - defaults = $.cookie('search_defaults'); - if (defaults) { - defaults = $.parseJSON(defaults); - } else { - defaults = { - species: "mouse", - group: "BXD", - type: "Hippocampus mRNA", - dataset: "HC_M2_0606_P" - }; - } - _ref = [['species', 'group'], ['group', 'type'], ['type', 'dataset'], ['dataset', null]]; - _results = []; - for (_i = 0, _len = _ref.length; _i < _len; _i++) { - item = _ref[_i]; - $("#" + item[0]).val(defaults[item[0]]); - if (item[1]) { - populate_function = "populate_" + item[1]; - console.log("Calling:", populate_function); - _results.push(window[populate_function]()); - } else { - _results.push(void 0); - } - } - return _results; - }; - var check_search_term = function() { - var or_search_term, and_search_term; - or_search_term = $('#or_search').val(); - and_search_term = $('#and_search').val(); - console.log("or_search_term:", or_search_term); - console.log("and_search_term:", and_search_term); - if (or_search_term === "" && and_search_term === "") { - alert("Please enter one or more search terms or search equations."); - return false; - } - }; - $("#make_default").click(make_default); - return $("#btsearch").click(check_search_term); -}); diff --git a/wqflask/wqflask/static/new/javascript/dataset_select_menu_edit_trait.js b/wqflask/wqflask/static/new/javascript/dataset_select_menu_edit_trait.js deleted file mode 100644 index 1d4a94d9..00000000 --- a/wqflask/wqflask/static/new/javascript/dataset_select_menu_edit_trait.js +++ /dev/null @@ -1,253 +0,0 @@ -var apply_default, check_search_term, dataset_info, group_info, make_default, open_window, populate_dataset, populate_group, populate_species, populate_type, process_json, redo_dropdown; -process_json = function(data) { - window.jdata = data; - populate_species(); - if ($('#type').length > 0) { //This is to determine if it's the index page or the submit_trait page (which only has species and group selection and no make default option) - return apply_default(); - } -}; - -$.ajax('/api/v_pre1/gen_dropdown', { - dataType: 'json', - success: process_json -}); - -populate_species = function() { - var species_list; - species_list = this.jdata.species; - redo_dropdown($('#species'), species_list); - return populate_group(); -}; -window.populate_species = populate_species; -populate_group = function() { - var group_list, species; - console.log("in populate group"); - species = $('#species').val(); - group_list = this.jdata.groups[species]; - for (_i = 0, _len = group_list.length; _i < (_len - 1); _i++) { - if (group_list[_i][0] == "BXD300"){ - group_list.splice(_i, 1) - } - } - redo_dropdown($('#group'), group_list); - if ($('#type').length > 0) { //This is to determine if it's the index page or the submit_trait page (which only has species and group selection and no make default option) - return populate_type(); - } -}; -window.populate_group = populate_group; -populate_type = function() { - var group, species, type_list; - console.log("in populate type"); - species = $('#species').val(); - group = $('#group').val(); - type_list = this.jdata.types[species][group]; - redo_dropdown($('#type'), type_list); - return populate_dataset(); -}; -window.populate_type = populate_type; -populate_dataset = function() { - var dataset_list, group, species, type; - console.log("in populate dataset"); - species = $('#species').val(); - group = $('#group').val(); - type = $('#type').val(); - console.log("sgt:", species, group, type); - dataset_list = this.jdata.datasets[species][group][type]; - console.log("pop_dataset:", dataset_list); - return redo_dropdown($('#dataset'), dataset_list); -}; -window.populate_dataset = populate_dataset; -redo_dropdown = function(dropdown, items) { - var item, _i, _len, _results; - console.log("in redo:", dropdown, items); - dropdown.empty(); - _results = []; - - if (dropdown.attr('id') == "group"){ - group_family_list = []; - for (_i = 0, _len = items.length; _i < _len; _i++) { - item = items[_i]; - group_family = item[2].toString().split(":")[1] - group_family_list.push([item[0], item[1], group_family]) - } - - current_family = "" - this_opt_group = null - for (_i = 0, _len = group_family_list.length; _i < _len; _i++) { - item = group_family_list[_i]; - if (item[2] != "None" && current_family == ""){ - current_family = item[2] - this_opt_group = $("<optgroup label=\"" + item[2] + "\">") - this_opt_group.append($("<option />").val(item[0]).text(item[1])); - } else if (current_family != "" && item[2] == current_family){ - this_opt_group.append($("<option />").val(item[0]).text(item[1])); - if (_i == group_family_list.length - 1){ - _results.push(dropdown.append(this_opt_group)) - } - } else if (current_family != "" && item[2] != current_family && item[2] != "None"){ - current_family = item[2] - _results.push(dropdown.append(this_opt_group)) - this_opt_group = $("<optgroup label=\"" + current_family + "\">") - this_opt_group.append($("<option />").val(item[0]).text(item[1])); - if (_i == group_family_list.length - 1){ - _results.push(dropdown.append(this_opt_group)) - } - } else if (current_family != "" && this_opt_group != null && item[2] == "None"){ - _results.push(dropdown.append(this_opt_group)) - current_family = "" - _results.push(dropdown.append($("<option />").val(item[0]).text(item[1]))); - } else { - _results.push(dropdown.append($("<option />").val(item[0]).text(item[1]))); - } - } - } else if (dropdown.attr('id') == "type"){ - type_family_list = []; - for (_i = 0, _len = items.length; _i < _len; _i++) { - item = items[_i]; - type_family_list.push([item[0], item[1], item[2]]) - } - - current_family = "" - this_opt_group = null - for (_i = 0, _len = type_family_list.length; _i < _len; _i++) { - item = type_family_list[_i]; - if (item[2] != "None" && current_family == ""){ - current_family = item[2] - this_opt_group = $("<optgroup label=\"" + item[2] + "\">") - this_opt_group.append($("<option />").val(item[0]).text(item[1])); - if (_i == type_family_list.length - 1){ - _results.push(dropdown.append(this_opt_group)) - } - } else if (current_family != "" && item[2] == current_family){ - this_opt_group.append($("<option />").val(item[0]).text(item[1])); - if (_i == type_family_list.length - 1){ - _results.push(dropdown.append(this_opt_group)) - } - } else if (current_family != "" && item[2] != current_family && item[2] != "None"){ - current_family = item[2] - _results.push(dropdown.append(this_opt_group)) - this_opt_group = $("<optgroup label=\"" + current_family + "\">") - this_opt_group.append($("<option />").val(item[0]).text(item[1])); - if (_i == type_family_list.length - 1){ - _results.push(dropdown.append(this_opt_group)) - } - } else { - _results.push(dropdown.append(this_opt_group)) - current_family = "" - _results.push(dropdown.append($("<option />").val(item[0]).text(item[1]))); - } - } - } else { - for (_i = 0, _len = items.length; _i < _len; _i++) { - item = items[_i]; - if (item.length > 2){ - _results.push(dropdown.append($("<option data-id=\""+item[0]+"\" />").val(item[1]).text(item[2]))); - } else { - _results.push(dropdown.append($("<option />").val(item[0]).text(item[1]))); - } - } - } - - return _results; -}; -$('#species').change((function(_this) { - return function() { - return populate_group(); - }; -})(this)); -$('#group').change((function(_this) { - return function() { - if ($('#type').length > 0) { //This is to determine if it's the index page or the submit_trait page (which only has species and group selection and no make default option) - return populate_type(); - } - else { - return false - } - }; -})(this)); -$('#type').change((function(_this) { - return function() { - return populate_dataset(); - }; -})(this)); -open_window = function(url, name) { - var options; - options = "menubar=yes,toolbar=yes,titlebar=yes,location=yes,resizable=yes,status=yes,scrollbars=yes,directories=yes,width=900"; - return open(url, name, options).focus(); -}; -group_info = function() { - var group, species, url; - species = $('#species').val(); - group = $('#group').val(); - url = "http://gn1.genenetwork.org/" + species + "Cross.html#" + group; - return open_window(url, "Group Info"); -}; -$('#group_info').click(group_info); -dataset_info = function() { - var dataset, url; - accession_id = $('#dataset option:selected').data("id"); - name = $('#dataset option:selected').val(); - if (accession_id != "None") { - url = "http://genenetwork.org/webqtl/main.py?FormID=sharinginfo&GN_AccessionId=" + accession_id + "&InfoPageName=" + name; - } else { - url = "http://genenetwork.org/webqtl/main.py?FormID=sharinginfo&InfoPageName=" + name; - } - return open_window(url, "Dataset Info"); -}; -$('#dataset_info').click(dataset_info); -make_default = function() { - var holder, item, jholder, _i, _len, _ref; - alert("The current settings are now your default.") - holder = {}; - _ref = ['species', 'group', 'type', 'dataset']; - for (_i = 0, _len = _ref.length; _i < _len; _i++) { - item = _ref[_i]; - holder[item] = $("#" + item).val(); - } - jholder = JSON.stringify(holder); - return $.cookie('search_defaults', jholder, { - expires: 365 - }); -}; -apply_default = function() { - var defaults, item, populate_function, _i, _len, _ref, _results; - defaults = $.cookie('search_defaults'); - if (defaults) { - defaults = $.parseJSON(defaults); - } else { - defaults = { - species: "mouse", - group: "BXD", - type: "Hippocampus mRNA", - dataset: "HC_M2_0606_P" - }; - } - - _ref = [['species', 'group'], ['group', 'type'], ['type', 'dataset'], ['dataset', null]]; - _results = []; - for (_i = 0, _len = _ref.length; _i < _len; _i++) { - item = _ref[_i]; - $("#" + item[0]).val(defaults[item[0]]); - if (item[1]) { - populate_function = "populate_" + item[1]; - console.log("Calling:", populate_function); - _results.push(window[populate_function]()); - } else { - _results.push(void 0); - } - } - return _results; -}; -check_search_term = function() { - var or_search_term, and_search_term; - or_search_term = $('#or_search').val(); - and_search_term = $('#and_search').val(); - console.log("or_search_term:", or_search_term); - console.log("and_search_term:", and_search_term); - if (or_search_term === "" && and_search_term === "") { - alert("Please enter one or more search terms or search equations."); - return false; - } -}; -$("#make_default").click(make_default); -$("#btsearch").click(check_search_term); |