diff options
| -rw-r--r--[-rwxr-xr-x] | web/javascript/selectDatasetMenu.js | 0 | ||||
| -rwxr-xr-x | wqflask/wqflask/static/new/javascript/dataset_select_items.js | 773 | ||||
| -rw-r--r-- | wqflask/wqflask/static/new/javascript/dataset_select_menu.coffee | 370 | ||||
| -rw-r--r-- | wqflask/wqflask/static/new/javascript/dataset_select_menu.js | 363 | ||||
| -rw-r--r-- | wqflask/wqflask/static/new/javascript/validation.js | 51 | ||||
| -rw-r--r-- | wqflask/wqflask/templates/new_index_page.html | 4 |
6 files changed, 1559 insertions, 2 deletions
diff --git a/web/javascript/selectDatasetMenu.js b/web/javascript/selectDatasetMenu.js index bb910a5b..bb910a5b 100755..100644 --- a/web/javascript/selectDatasetMenu.js +++ b/web/javascript/selectDatasetMenu.js diff --git a/wqflask/wqflask/static/new/javascript/dataset_select_items.js b/wqflask/wqflask/static/new/javascript/dataset_select_items.js new file mode 100755 index 00000000..11be18cc --- /dev/null +++ b/wqflask/wqflask/static/new/javascript/dataset_select_items.js @@ -0,0 +1,773 @@ +var sArr = [ +{txt:'',val:''}, +{txt:'Human',val:'human'}, +{txt:'Macaque monkey',val:'macaque monkey'}, +{txt:'Mouse',val:'mouse'}, +{txt:'Rat',val:'rat'}, +{txt:'Drosophila',val:'drosophila'}, +{txt:'Arabidopsis thaliana',val:'arabidopsis'}, +{txt:'Barley',val:'barley'}, +{txt:'Soybean',val:'soybean'}, +{txt:'Tomato',val:'tomato'}, +{txt:'All Species',val:'All Species'}]; + +var gArr = [ +{txt:'',val:''}, +{txt:'AD Cases & Controls (Liang)',val:'AD-cases-controls'}, +{txt:'AD Cases & Controls (Myers)',val:'AD-cases-controls-Myers'}, +{txt:'AKXD',val:'AKXD'}, +{txt:'AXB/BXA',val:'AXBXA'}, +{txt:'B6BTBRF2',val:'B6BTBRF2'}, +{txt:'B6D2F2',val:'B6D2F2'}, +{txt:'BayXSha',val:'BayXSha'}, +{txt:'BDF2 UCLA',val:'BDF2-1999'}, +{txt:'BDF2-2005',val:'BDF2-2005'}, +{txt:'BHF2 (Apoe Null) UCLA',val:'BHF2'}, +{txt:'BH/HB F2 UCLA',val:'BHHBF2'}, +{txt:'BXD',val:'BXD'}, +{txt:'BXH',val:'BXH'}, +{txt:'CANDLE',val:'CANDLE'}, +{txt:'CEPH Families',val:'CEPH-2004'}, +{txt:'ColXBur',val:'ColXBur'}, +{txt:'ColXCvi',val:'ColXCvi'}, +{txt:'CastB6/B6Cast F2 UCLA',val:'CTB6F2'}, +{txt:'CXB',val:'CXB'}, +{txt:'Drosophila Genetic Reference Panel',val:'DGRP'}, +{txt:'Harvard Brain Tissue Resource Center',val:'HB'}, +{txt:'Human Liver Cohort',val:'HLC'}, +{txt:'Heterogeneous Stock',val:'HS'}, +{txt:'Heterogeneous Stock Collaborative Cross',val:'HS-CC'}, +{txt:'KIN/YSM',val:'HSB'}, +{txt:'HXB/BXH',val:'HXBBXH'}, +{txt:'J12XJ58F2',val:'J12XJ58F2'}, +{txt:'LXP',val:'LXP'}, +{txt:'LXS',val:'LXS'}, +{txt:'Macaca fasicularis (Cynomolgus monkey)',val:'Macaca-fasicularis'}, +{txt:'Mouse Diversity Panel',val:'MDP'}, +{txt:'NZB/FVB N2 NCI',val:'NZBXFVB-N2'}, +{txt:'Oregon-R x 2b3',val:'Oregon-R_x_2b3'}, +{txt:'QSM',val:'QSM'}, +{txt:'UIOWA SRxSHRSP F2',val:'SRxSHRSPF2'}, +{txt:'SXM',val:'SXM'}, +{txt:'All Groups',val:'all groups'}]; + +var tArr = [ +{txt:'',val:''}, +{txt:'Adipose mRNA',val:'Adipose'}, +{txt:'Adrenal Gland mRNA',val:'Adrenal Gland'}, +{txt:'Amygdala mRNA',val:'Amygdala'}, +{txt:'Brain mRNA',val:'Brain'}, +{txt:'Cartilage mRNA',val:'Cartilage'}, +{txt:'Caudal Ganglionic Eminence mRNA',val:'Caudal Ganglionic Eminence'}, +{txt:'Cerebellar Cortex mRNA',val:'Cerebellar Cortex'}, +{txt:'Cerebellum mRNA',val:'Cerebellum'}, +{txt:'Diencephalon mRNA',val:'Diencephalon'}, +{txt:'Dorsal Thalamus mRNA',val:'Dorsal Thalamus'}, +{txt:'Dorsolateral Prefrontal Cortex mRNA',val:'Dorsolateral Prefrontal Cortex'}, +{txt:'Embryo mRNA',val:'Embryo'}, +{txt:'Eye mRNA',val:'Eye'}, +{txt:'Frontal Cerebral Wall mRNA',val:'Frontal Cerebral Wall'}, +{txt:'Heart mRNA',val:'Heart'}, +{txt:'Hematopoietic Cells mRNA',val:'Hematopoietic Cells'}, +{txt:'Hippocampus mRNA',val:'Hippocampus'}, +{txt:'Hypothalamus mRNA',val:'Hypothalamus'}, +{txt:'Inferior Temporal Cortex mRNA',val:'Inferior Temporal Cortex'}, +{txt:'Kidney mRNA',val:'Kidney'}, +{txt:'Lateral Ganglionic Eminence mRNA',val:'Lateral Ganglionic Eminence'}, +{txt:'Leaf mRNA',val:'Leaf'}, +{txt:'Leucocytes mRNA',val:'Leucocytes'}, +{txt:'Liver mRNA',val:'Liver'}, +{txt:'Lung mRNA',val:'Lung'}, +{txt:'Lymphoblast B-cell mRNA',val:'Lymphoblast B-cell'}, +{txt:'Mammary Tumors mRNA',val:'Mammary Tumors'}, +{txt:'Medial Ganglionic Eminence mRNA',val:'Medial Ganglionic Eminence'}, +{txt:'Medial Prefrontal Cortex mRNA',val:'Medial Prefrontal Cortex'}, +{txt:'Mediodorsal Nucleus of Thalamus mRNA',val:'Mediodorsal Nucleus of Thalamus'}, +{txt:'Midbrain mRNA',val:'Midbrain'}, +{txt:'Muscle mRNA',val:'Muscle'}, +{txt:'Neocortex mRNA',val:'Neocortex'}, +{txt:'Newborn Cord Blood mRNA',val:'Newborn Cord Blood'}, +{txt:'Nucleus Accumbens mRNA',val:'Nucleus Accumbens'}, +{txt:'Occipital Cerebral Wall mRNA',val:'Occipital Cerebral Wall'}, +{txt:'Orbital Prefrontal Cortex mRNA',val:'Orbital Prefrontal Cortex'}, +{txt:'Parietal Cerebral Wall mRNA',val:'Parietal Cerebral Wall'}, +{txt:'Peritoneal Fat mRNA',val:'Peritoneal Fat'}, +{txt:'Posterior Inferior Parietal Cortex mRNA',val:'Posterior Inferior Parietal Cortex'}, +{txt:'Posterior Superior Temporal Cortex mRNA',val:'Posterior Superior Temporal Cortex'}, +{txt:'Prefrontal Cortex mRNA',val:'Prefrontal Cortex'}, +{txt:'Primary Auditory (A1) Cortex mRNA',val:'Primary Auditory (A1) Cortex'}, +{txt:'Primary Motor (M1) Cortex mRNA',val:'Primary Motor (M1) Cortex'}, +{txt:'Primary Somatosensory (S1) Cortex mRNA',val:'Primary Somatosensory (S1) Cortex'}, +{txt:'Primary Visual Cortex mRNA',val:'Primary Visual Cortex'}, +{txt:'Retina mRNA',val:'Retina'}, +{txt:'Spleen mRNA',val:'Spleen'}, +{txt:'Striatum mRNA',val:'Striatum'}, +{txt:'T Cell (helper) mRNA',val:'T Cell (helper)'}, +{txt:'T Cell (regulatory) mRNA',val:'T Cell (regulatory)'}, +{txt:'Temporal Cerebral Wall mRNA',val:'Temporal Cerebral Wall'}, +{txt:'Thymus mRNA',val:'Thymus'}, +{txt:'Upper (Rostral) Rhombic Lip mRNA',val:'Upper (Rostral) Rhombic Lip'}, +{txt:'Ventral Forebrain mRNA',val:'Ventral Forebrain'}, +{txt:'Ventral Tegmental Area mRNA',val:'Ventral Tegmental Area'}, +{txt:'Ventrolateral Prefrontal Cortex mRNA',val:'Ventrolateral Prefrontal Cortex'}, +{txt:'Whole Body mRNA',val:'Whole Body'}, +{txt:'Phenotypes',val:'Phenotypes'}, +{txt:'Genotypes',val:'Genotypes'}]; + +var dArr = [ +{txt:'',val:''}, +{txt:'GSE15222 Human Brain Alzheimer Myers (Apr09) RankInv',val:'GSE15222_F_A_RI_0409'}, +{txt:'GSE15222 Human Brain Normal Myers (Apr09) RankInv',val:'GSE15222_F_N_RI_0409'}, +{txt:'Normal HEI Retina (April 2010) RankInv',val:'G2NEI_ILM_Retina_BXD_RI0410'}, +{txt:'Full HEI Retina (April 2010) RankInv',val:'Illum_Retina_BXD_RankInv0410'}, +{txt:'ONC HEI Retina (April 2012) RankInv',val:'ONCRetILM6_0412'}, +{txt:'B6D2 ONC Retina (April 2012) RankInv **',val:'B6D2ONCILM_0412'}, +{txt:'INIA Macaca fasicularis Nucleus Accumbens (Jan10) RMA **',val:'INIA_MacFas_Ac_RMA_0110'}, +{txt:'UCLA CTB6/B6CTF2 Liver (2005) mlratio',val:'UCLA_CTB6B6CTF2_LIVER_2005'}, +{txt:'UCLA CTB6/B6CTF2 Adipose (2005) mlratio',val:'UCLA_CTB6B6CTF2_ADIPOSE_2005'}, +{txt:'UCLA CTB6/B6CTF2 Brain (2005) mlratio',val:'UCLA_CTB6B6CTF2_BRAIN_2005'}, +{txt:'UCLA CTB6/B6CTF2 Muscle (2005) mlratio',val:'UCLA_CTB6B6CTF2_MUSCLE_2005'}, +{txt:'INIA Macaca fasicularis Hippocampus (Jan10) RMA **',val:'INIA_MacFas_Hc_RMA_0110'}, +{txt:'UCLA CTB6B6CTF2 Muscle Female mlratio **',val:'UCLA_CTB6B6CTF2_MUSCLE_FEMALE'}, +{txt:'INIA Macaca fasicularis Amygdala (Jan10) RMA **',val:'INIA_MacFas_AMG_RMA_0110'}, +{txt:'UCLA CTB6B6CTF2 Adipose Female mlratio **',val:'UCLA_CTB6B6CTF2_ADIPOSE_FEMALE'}, +{txt:'UCLA CTB6B6CTF2 Brain Female mlratio **',val:'UCLA_CTB6B6CTF2_BRAIN_FEMALE'}, +{txt:'UCLA CTB6B6CTF2 Liver Female mlratio **',val:'UCLA_CTB6B6CTF2_LIVER_FEMALE'}, +{txt:'VU BXD Midbrain Agilent SurePrint G3 Mouse GE (May12) Quantile **',val:'VUBXDMouseMidBrainQ0512'}, +{txt:'GSE16780 UCLA Hybrid MDP Liver Affy HT M430A (Sep11) RMA',val:'GSE16780_UCLA_ML0911'}, +{txt:'EPFL/LISP BXD Muscle Affy Mouse Gene 1.0 ST (Dec11) RMA **',val:'EPFLMouseMuscleRMA1211'}, +{txt:'EPFL/LISP BXD HFD Muscle Affy Mouse Gene 1.0 ST (Dec11) RMA **',val:'EPFLMouseMuscleHFDRMA1211'}, +{txt:'EPFL/LISP BXD CD Muscle Affy Mouse Gene 1.0 ST (Dec11) RMA **',val:'EPFLMouseMuscleCDRMA1211'}, +{txt:'BIDMC/UTHSC Dev Striatum P14 ILMv6.2 (Nov11) RankInv **',val:'DevStriatum_ILM6.2P14RInv_1111'}, +{txt:'BIDMC/UTHSC Dev Striatum P3 ILMv6.2 (Nov11) RankInv **',val:'DevStriatum_ILM6.2P3RInv_1111'}, +{txt:'BIDMC/UTHSC Dev Neocortex P14 ILMv6.2 (Nov11) RankInv',val:'DevNeocortex_ILM6.2P14RInv_1111'}, +{txt:'BIDMC/UTHSC Dev Neocortex P3 ILMv6.2 (Nov11) RankInv',val:'DevNeocortex_ILM6.2P3RInv_1111'}, +{txt:'G2 HEI ONC Retina Illumina V6.2 (Sep11) RankInv **',val:'G2HEIONCRetILM6_0911'}, +{txt:'HEI ONC vs Control Retina Illumina V6.2 (Sep11) RankInv **',val:'HEIONCvsCRetILM6_0911'}, +{txt:'JAX Liver Affy M430 2.0 (Jul11) MDP',val:'JAX_CSB_L_0711'}, +{txt:'JAX Liver HF Affy M430 2.0 (Jul11) MDP',val:'JAX_CSB_L_HF_0711'}, +{txt:'JAX Liver 6C Affy M430 2.0 (Jul11) MDP',val:'JAX_CSB_L_6C_0711'}, +{txt:'CANDLE Newborn Cord ILMv6.3 (Jun11) QUANT **',val:'CANDLE_NB_0711'}, +{txt:'KIN/YSM Human AMY Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_AMY_0711'}, +{txt:'KIN/YSM Human A1C Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_A1C_0711'}, +{txt:'KIN/YSM Human TC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_TC_0711'}, +{txt:'KIN/YSM Human CBC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_CBC_0711'}, +{txt:'KIN/YSM Human CGE Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_CGE_0711'}, +{txt:'KIN/YSM Human FC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_FC_0711'}, +{txt:'KIN/YSM Human S1C Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_S1C_0711'}, +{txt:'KIN/YSM Human STR Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_STR_0711'}, +{txt:'KIN/YSM Human URL Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_URL_0711'}, +{txt:'KIN/YSM Human V1C Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_V1C_0711'}, +{txt:'KIN/YSM Human VF Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_VF_0711'}, +{txt:'KIN/YSM Human VFC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_VFC_0711'}, +{txt:'KIN/YSM Human STC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_STC_0711'}, +{txt:'KIN/YSM Human ITC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_ITC_0711'}, +{txt:'KIN/YSM Human LGE Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_LGE_0711'}, +{txt:'KIN/YSM Human M1C Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_M1C_0711'}, +{txt:'KIN/YSM Human MD Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_MD_0711'}, +{txt:'KIN/YSM Human IPC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_IPC_0711'}, +{txt:'KIN/YSM Human HIP Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_HIP_0711'}, +{txt:'KIN/YSM Human MFC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_MFC_0711'}, +{txt:'KIN/YSM Human DFC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_DFC_0711'}, +{txt:'KIN/YSM Human DIE Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_DIE_0711'}, +{txt:'KIN/YSM Human MGE Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_MGE_0711'}, +{txt:'KIN/YSM Human DTH Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_DTH_0711'}, +{txt:'KIN/YSM Human PC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_PC_0711'}, +{txt:'KIN/YSM Human OC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_OC_0711'}, +{txt:'KIN/YSM Human OFC Affy Hu-Exon 1.0 ST (Jul11) Quantile **',val:'KIN_YSM_OFC_0711'}, +{txt:'HBTRC-MLC Human Cerebellum Agilent (Jun11) mlratio',val:'HBTRC-MLC_0611'}, +{txt:'HBTRC-MLC Human Cerebellum Agilent Normal (Jun11) mlratio',val:'HBTRC-MLC_N_0611'}, +{txt:'HBTRC-MLC Human Prefrontal Cortex Agilent (Jun11) mlratio',val:'HBTRC-MLPFC_0611'}, +{txt:'HBTRC-MLC Human Cerebellum Agilent AD (Jun11) mlratio',val:'HBTRC-MLC_AD_0611'}, +{txt:'HBTRC-MLC Human Visual Cortex Agilent (Jun11) mlratio',val:'HBTRC-MLVC_0611'}, +{txt:'HBTRC-MLC Human Prefrontal Cortex Agilent Normal (Jun11) mlratio',val:'HBTRC-MLPFC_N_0611'}, +{txt:'HBTRC-MLC Human Prefrontal Cortex Agilent AD (Jun11) mlratio',val:'HBTRC-MLPFC_AD_0611'}, +{txt:'HBTRC-MLC Human Cerebellum Agilent HD (Jun11) mlratio',val:'HBTRC-MLC_HD_0611'}, +{txt:'HBTRC-MLC Human Visual Cortex Agilent Normal (Jun11) mlratio',val:'HBTRC-MLVC_N_0611'}, +{txt:'HBTRC-MLC Human Prefrontal Cortex Agilent HD (Jun11) mlratio',val:'HBTRC-MLPFC_HD_0611'}, +{txt:'HBTRC-MLC Human Visual Cortex Agilent AD (Jun11) mlratio',val:'HBTRC-MLVC_AD_0611'}, +{txt:'HBTRC-MLC Human Visual Cortex Agilent HD (Jun11) mlratio',val:'HBTRC-MLVC_HD_0611'}, +{txt:'INIA Amygdala Cohort Affy MoGene 1.0 ST (Mar11) RMA',val:'INIA_AmgCoh_0311'}, +{txt:'INIA Amygdala Affy MoGene 1.0 ST (Nov10) RMA',val:'INIA_Amg_BLA_RMA_1110'}, +{txt:'INIA Amygdala Affy MoGene 1.0 ST (Nov10) RMA Male',val:'INIA_Amg_BLA_RMA_M_1110'}, +{txt:'INIA Amygdala Affy MoGene 1.0 ST (Nov10) RMA Female',val:'INIA_Amg_BLA_RMA_F_1110'}, +{txt:'GSE9588 Human Liver Normal (Mar11) Both Sexes',val:'HLC_0311'}, +{txt:'GSE9588 Human Liver Normal (Mar11) Males',val:'HLCM_0311'}, +{txt:'HZI Thelp M430v2 (Feb11) RMA',val:'RTHC_0211_R'}, +{txt:'GSE5281 Human Brain Normal Full Liang (Jul09) RMA',val:'GSE5281_F_RMA_N_0709'}, +{txt:'GSE5281 Human Brain Alzheimer Full Liang (Jul09) RMA',val:'GSE5281_F_RMA_Alzh_0709'}, +{txt:'OHSU HS-CC Striatum ILM6v1 (Feb11) RankInv',val:'OHSU_HS-CC_ILMStr_0211'}, +{txt:'NCSU Drosophila Whole Body (Jan11) RMA',val:'NCSU_DrosWB_LC_RMA_0111'}, +{txt:'UNC Agilent G4121A Liver LOWESS Stanford (Jan06) Females',val:'LV_G_0106_F'}, +{txt:'UNC Agilent G4121A Liver LOWESS Stanford (Jan06) Males',val:'LV_G_0106_M'}, +{txt:'UNC Agilent G4121A Liver LOWESS Stanford (Jan06) Both Sexes',val:'LV_G_0106_B'}, +{txt:'GenEx BXD Sal Liver Affy M430 2.0 (Feb11) RMA Females **',val:'GenEx_BXD_liverSal_RMA_F_0211'}, +{txt:'GenEx BXD Sal Liver Affy M430 2.0 (Feb11) RMA Males **',val:'GenEx_BXD_liverSal_RMA_M_0211'}, +{txt:'GenEx BXD Sal Liver Affy M430 2.0 (Feb11) RMA Both Sexes **',val:'GenEx_BXD_liverSal_RMA_0211'}, +{txt:'GenEx BXD EtOH Liver Affy M430 2.0 (Feb11) RMA Females **',val:'GenEx_BXD_liverEt_RMA_F_0211'}, +{txt:'GenEx BXD EtOH Liver Affy M430 2.0 (Feb11) RMA Males **',val:'GenEx_BXD_liverEt_RMA_M_0211'}, +{txt:'GenEx BXD EtOH Liver Affy M430 2.0 (Feb11) RMA Both Sexes **',val:'GenEx_BXD_liverEt_RMA_0211'}, +{txt:'SUH BXD Liver Affy Mouse Gene 1.0 ST (Jun11) RMA **',val:'SUH_Liv_RMA_0611'}, +{txt:'HQF BXD Striatum ILM6.1 (Dec10v2) RankInv',val:'UTHSC_Striatum_RankInv_1210'}, +{txt:'HQF BXD Striatum ILM6.1 (Dec10) RankInv',val:'UTHSC_Str_RankInv_1210'}, +{txt:'HQF BXD Neocortex ILM6v1.1 (Dec10v2) RankInv',val:'HQFNeoc_1210v2_RankInv'}, +{txt:'UTHSC Affy MoGene 1.0 ST Spleen (Dec10) RMA',val:'UTHSC_SPL_RMA_1210'}, +{txt:'HQF BXD Neocortex ILM6v1.1 (Dec10) RankInv',val:'HQFNeoc_1210_RankInv'}, +{txt:'INIA Hypothalamus Affy MoGene 1.0 ST (Nov10)',val:'INIA_Hyp_RMA_1110'}, +{txt:'INIA Hypothalamus Affy MoGene 1.0 ST (Nov10) Male',val:'INIA_Hyp_M_RMA_1110'}, +{txt:'INIA Hypothalamus Affy MoGene 1.0 ST (Nov10) Female',val:'INIA_Hyp_F_RMA_1110'}, +{txt:'UTHSC Affy MoGene 1.0 ST Spleen (Oct10) RMA',val:'UTHSC_SPL_RMA_1010'}, +{txt:'Hippocampus Consortium M430v2 (Jun06) RMA MDP',val:'HC_M2_0606_MDP'}, +{txt:'UMUTAffy Hippocampus Exon (Feb09) RMA MDP',val:'UMUTAffyExon_0209_RMA_MDP'}, +{txt:'OX UK HS ILM6v1.1 Lung (May 2010) RankInv',val:'OXUKHS_ILMLung_RI0510'}, +{txt:'OX UK HS ILM6v1.1 Liver (May 2010) RankInv',val:'OXUKHS_ILMLiver_RI0510'}, +{txt:'OX UK HS ILM6v1.1 Hippocampus (May 2010) RankInv',val:'OXUKHS_ILMHipp_RI0510'}, +{txt:'INIA Macaca fasicularis Prefrontal Cortex (Jan10) RMA **',val:'INIA_MacFas_Pf_RMA_0110'}, +{txt:'INIA Macaca fasicularis Brain (Jan10) RMA **',val:'INIA_MacFas_brain_RMA_0110'}, +{txt:'UAB Whole body D.m. mRNA control (Oct09) RMA',val:'UAB_DrosWB_LC_RMA_1009'}, +{txt:'UAB Whole body D.m. mRNA lead (pbAc) (Oct09) RMA',val:'UAB_DrosWB_LE_RMA_1009'}, +{txt:'UMCG Stem Cells ILM6v1.1 (Apr09) original',val:'UMCG_0907_HemaStem_ori'}, +{txt:'UMCG Stem Cells ILM6v1.1 (Apr09) transformed',val:'UMCG_0907_HemaStem'}, +{txt:'UMCG Progenitor Cells ILM6v1.1 (Apr09) original',val:'UMCG_0907_Pro_ori'}, +{txt:'UMCG Progenitor Cells ILM6v1.1 (Apr09) transformed',val:'UMCG_0907_Pro'}, +{txt:'UMCG Erythroid Cells ILM6v1.1 (Apr09) original',val:'UMCG_0907_Eryth_ori'}, +{txt:'UMCG Erythroid Cells ILM6v1.1 (Apr09) transformed',val:'UMCG_0907_Eryth'}, +{txt:'UMCG Myeloid Cells ILM6v1.1 (Apr09) original',val:'UMCG_0907_Myeloid_ori'}, +{txt:'UMCG Myeloid Cells ILM6v1.1 (Apr09) transformed',val:'UMCG_0907_Myeloid'}, +{txt:'UTHSC CEPH B-cells Illumina (Sep09) RankInv',val:'UT_CEPH_RankInv0909'}, +{txt:'Mouse kidney M430v2 Female (Aug06) RMA',val:'MA_M2F_0706_R'}, +{txt:'Mouse kidney M430v2 Male (Aug06) RMA',val:'MA_M2M_0706_R'}, +{txt:'Barley1 Leaf INOC TTKS (Aug09) RMA',val:'B1LI0809R'}, +{txt:'Barley1 Leaf INOC TTKS (Aug09) MAS5',val:'B1LI0809M5'}, +{txt:'Barley1 Leaf MOCK TTKS (Aug09) MAS5',val:'B1MI0809M5'}, +{txt:'Barley1 Leaf MOCK TTKS (Aug09) RMA',val:'B1MI0809R'}, +{txt:'GSE15222 Human Brain Myers (Apr09) RankInv',val:'GSE15222_F_RI_0409'}, +{txt:'GSE5281 Human Brain Full Liang (Jul09) RMA',val:'GSE5281_F_RMA0709'}, +{txt:'GSE5281 Human Brain Best 102 Liang (Jul09) RMA',val:'GSE5281_RMA0709'}, +{txt:'UT Hippocampus Affy RaEx 1.0 Exon (Jul09) RMA',val:'UT_HippRatEx_RMA_0709'}, +{txt:'VCU BXD VTA EtOH M430 2.0 (Jun09) RMA **',val:'VCUEtOH_0609_R'}, +{txt:'VCU BXD VTA Sal M430 2.0 (Jun09) RMA **',val:'VCUSal_0609_R'}, +{txt:'VCU BXD VTA Et vs Sal M430 2.0 (Jun09) Sscore **',val:'VCUEtvsSal_0609_R'}, +{txt:'IoP Affy MOE 430v2 Spleen (May09) RMA',val:'IoP_SPL_RMA_0509'}, +{txt:'NCI Mammary M430v2 (Apr09) RMA',val:'NCI_Mam_Tum_RMA_0409'}, +{txt:'NCI Mammary LMT miRNA v2 (Apr09) RMA',val:'NCI_Agil_Mam_Tum_RMA_0409'}, +{txt:'MDC/CAS/UCL Liver 230v2 (Dec08) RMA',val:'HXB_Liver_1208'}, +{txt:'MDC/CAS/UCL Heart 230_V2 (Dec08) RMA',val:'HXB_Heart_1208'}, +{txt:'MDC/CAS/UCL Adrenal 230A (Dec08) RMA',val:'HXB_Adrenal_1208'}, +{txt:'UWA Illumina PBL (Nov08) RSN **',val:'Illum_BXD_PBL_1108'}, +{txt:'UWA Illumina Thymus (Nov08) RSN **',val:'Illum_BXD_Thy_1108'}, +{txt:'UWA Illumina Spleen (Nov08) RSN **',val:'Illum_BXD_Spl_1108'}, +{txt:'Monks CEPH B-cells Agilent (Dec04) Log10Ratio',val:'Human_1008'}, +{txt:'UTK Spleen ILM6.1 (Jan10) VST',val:'UTK_BXDSpl_VST_0110'}, +{txt:'Eye AXBXA Illumina V6.2(Oct08) RankInv Beta',val:'Eye_AXBXA_1008_RankInv'}, +{txt:'Eye M430v2 (Sep08) RMA',val:'Eye_M2_0908_R'}, +{txt:'Eye M430v2 Mutant Gpnmb (Sep08) RMA **',val:'Eye_M2_0908_R_NB'}, +{txt:'Eye M430v2 WT Gpnmb (Sep08) RMA **',val:'Eye_M2_0908_R_ND'}, +{txt:'Eye M430v2 Mutant Tyrp1 (Sep08) RMA **',val:'Eye_M2_0908_R_MT'}, +{txt:'Eye M430v2 WT WT (Sep08) RMA **',val:'Eye_M2_0908_WTWT'}, +{txt:'Eye M430v2 WT Tyrp1 (Sep08) RMA **',val:'Eye_M2_0908_R_WT'}, +{txt:'BXD Glaucoma Affy M430 2.0 Trial (Sep11) RMA **',val:'BXD_GLA_0911'}, +{txt:'UCLA BXH and BXD Cartilage v2',val:'UCLA_BXHBXD_CARTILAGE_V2'}, +{txt:'UCLA BXD and BXH Cartilage v2',val:'UCLA_BXDBXH_CARTILAGE_V2'}, +{txt:'UCLA BXD and BXH Cartilage',val:'UCLA_BXDBXH_CARTILAGE'}, +{txt:'UCLA BXH and BXD Cartilage',val:'UCLA_BXHBXD_CARTILAGE'}, +{txt:'UCLA BHF2 Brain Male mlratio',val:'UCLA_BHF2_BRAIN_MALE'}, +{txt:'UCLA BHF2 Brain Female mlratio',val:'UCLA_BHF2_BRAIN_FEMALE'}, +{txt:'UCLA BHF2 Adipose Female mlratio',val:'UCLA_BHF2_ADIPOSE_FEMALE'}, +{txt:'UCLA BHF2 Adipose Male mlratio',val:'UCLA_BHF2_ADIPOSE_MALE'}, +{txt:'UCLA CTB6B6CTF2 Muscle Male mlratio **',val:'UCLA_CTB6B6CTF2_MUSCLE_MALE'}, +{txt:'UCLA CTB6B6CTF2 Liver Male mlratio **',val:'UCLA_CTB6B6CTF2_LIVER_MALE'}, +{txt:'UCLA CTB6B6CTF2 Brain Male mlratio **',val:'UCLA_CTB6B6CTF2_BRAIN_MALE'}, +{txt:'UCLA CTB6B6CTF2 Adipose Male mlratio **',val:'UCLA_CTB6B6CTF2_ADIPOSE_MALE'}, +{txt:'UCLA BHF2 Liver Male mlratio',val:'UCLA_BHF2_LIVER_MALE'}, +{txt:'UCLA BHF2 Liver Female mlratio',val:'UCLA_BHF2_LIVER_FEMALE'}, +{txt:'UCLA BHHBF2 Brain Female Only',val:'UCLA_BHHBF2_BRAIN_FEMALE'}, +{txt:'UCLA BHHBF2 Liver Female Only',val:'UCLA_BHHBF2_LIVER_FEMALE'}, +{txt:'UCLA BHHBF2 Muscle Male Only',val:'UCLA_BHHBF2_MUSCLE_MALE'}, +{txt:'UCLA BHHBF2 Muscle Female Only',val:'UCLA_BHHBF2_MUSCLE_FEMALE'}, +{txt:'UCLA BHHBF2 Liver Male Only',val:'UCLA_BHHBF2_LIVER_MALE'}, +{txt:'UCLA BHHBF2 Brain Male Only',val:'UCLA_BHHBF2_BRAIN_MALE'}, +{txt:'UCLA BHHBF2 Adipose Female Only',val:'UCLA_BHHBF2_ADIPOSE_FEMALE'}, +{txt:'UCLA BHHBF2 Adipose Male Only',val:'UCLA_BHHBF2_ADIPOSE_MALE'}, +{txt:'UCLA BHF2 Muscle Female mlratio **',val:'UCLA_BHF2_MUSCLE_FEMALE'}, +{txt:'UCLA BHF2 Muscle Male mlratio **',val:'UCLA_BHF2_MUSCLE_MALE'}, +{txt:'UCLA BXH Cartilage',val:'UCLA_BXH_CARTILAGE'}, +{txt:'UCLA BXD Cartilage',val:'UCLA_BXD_CARTILAGE'}, +{txt:'UCLA BHHBF2 Adipose (2005) mlratio **',val:'UCLA_BHHBF2_ADIPOSE_2005'}, +{txt:'UCLA BHHBF2 Brain (2005) mlratio **',val:'UCLA_BHHBF2_BRAIN_2005'}, +{txt:'UCLA BHHBF2 Liver (2005) mlratio **',val:'UCLA_BHHBF2_LIVER_2005'}, +{txt:'UCLA BHHBF2 Muscle (2005) mlratio **',val:'UCLA_BHHBF2_MUSCLE_2005'}, +{txt:'UCLA BHF2 Adipose (June05) mlratio',val:'UCLA_BHF2_ADIPOSE_0605'}, +{txt:'UCLA BDF2 Liver (1999) mlratio',val:'UCLA_BDF2_LIVER_1999'}, +{txt:'UCLA BHF2 Muscle (June05) mlratio **',val:'UCLA_BHF2_MUSCLE_0605'}, +{txt:'UCLA BHF2 Brain (June05) mlratio',val:'UCLA_BHF2_BRAIN_0605'}, +{txt:'UCLA BHF2 Liver (June05) mlratio',val:'UCLA_BHF2_LIVER_0605'}, +{txt:'HZI Lung M430v2 (Apr08) RMA',val:'HZI_0408_R'}, +{txt:'HZI Lung M430v2 (Apr08) MAS5',val:'HZI_0408_M'}, +{txt:'HQF BXD Neocortex ILM6v1.1 (Feb08) RankInv',val:'HQFNeoc_0208_RankInv'}, +{txt:'VCU BXD NA Sal M430 2.0 (Oct07) RMA',val:'VCUSalo_1007_R'}, +{txt:'VCU BXD NA EtOH M430 2.0 (Oct07) RMA **',val:'VCUEtOH_1007_R'}, +{txt:'VCU BXD NA Et vs Sal M430 2.0 (Oct07) Sscore **',val:'VCUSal_1007_R'}, +{txt:'Stuart Spleen M430v2 (Nov07) RMA',val:'STSPL_1107_R'}, +{txt:'HQF BXD Striatum ILM6.1 (Nov07) RankInv',val:'UTHSC_1107_RankInv'}, +{txt:'Hippocampus Illumina (Aug07) LOESS',val:'Illum_LXS_Hipp_loess0807'}, +{txt:'Hippocampus Illumina (Aug07) LOESS_NB',val:'Illum_LXS_Hipp_loess_nb0807'}, +{txt:'Hippocampus Illumina (Aug07) QUANT',val:'Illum_LXS_Hipp_quant0807'}, +{txt:'Hippocampus Illumina (Aug07) QUANT_NB',val:'Illum_LXS_Hipp_quant_nb0807'}, +{txt:'Hippocampus Illumina (Aug07) RSN',val:'Illum_LXS_Hipp_rsn0807'}, +{txt:'Hippocampus Illumina (Aug07) RSN_NB',val:'Illum_LXS_Hipp_rsn_nb0807'}, +{txt:'VCU BXD PFC EtOH M430 2.0 (Dec06) RMA',val:'VCUEtOH_1206_R'}, +{txt:'VCU BXD PFC Sal M430 2.0 (Dec06) RMA',val:'VCUSal_1206_R'}, +{txt:'VCU BXD PFC Et vs Sal M430 2.0 (Dec06) Sscore',val:'VCUSal_1006_R'}, +{txt:'VCU BXD PFC CIE Air M430 2.0 (Jan11) RMA **',val:'VCU_PF_Air_0111_R'}, +{txt:'VCU BXD PFC CIE EtOH M430 2.0 (Jan11) RMA **',val:'VCU_PF_Et_0111_R'}, +{txt:'VCU BXD PFC EtOH vs CIE Air M430 2.0 (Jan11) Sscore **',val:'VCU_PF_AvE_0111_Ss'}, +{txt:'Hippocampus Illumina (May07) RankInv',val:'Hipp_Illumina_RankInv_0507'}, +{txt:'VCU LXS PFC EtOH M430A 2.0 (Aug06) RMA **',val:'VCUEtOH_0806_R'}, +{txt:'VCU LXS PFC Sal M430A 2.0 (Aug06) RMA',val:'VCUSal_0806_R'}, +{txt:'VCU LXS PFC Et vs Sal M430A 2.0 (Aug06) Sscore **',val:'VCUEt_vs_Sal_0806_R'}, +{txt:'Barley1 Embryo gcRMA SCRI (Dec06)',val:'B139_K_1206_R'}, +{txt:'Barley1 Leaf MAS 5.0 SCRI (Dec06)',val:'B30_K_1206_M'}, +{txt:'Barley1 Leaf gcRMAn SCRI (Dec06)',val:'B30_K_1206_Rn'}, +{txt:'Barley1 Leaf gcRMA SCRI (Dec06)',val:'B30_K_1206_R'}, +{txt:'Barley1 Embryo MAS 5.0 SCRI (Dec06)',val:'B139_K_1206_M'}, +{txt:'UCHSC BXD Whole Brain M430 2.0 (Nov06) RMA',val:'BR_M2_1106_R'}, +{txt:'HZI Treg M430v2 (Feb11) RMA',val:'RTC_1106_R'}, +{txt:'UIOWA Eye mRNA RAE230v2 (Sep06) RMA',val:'UIOWA_Eye_RMA_0906'}, +{txt:'Mouse kidney M430v2 Sex Balanced (Aug06) RMA',val:'MA_M2_0806_R'}, +{txt:'Mouse Kidney M430v2 Sex Balanced (Aug06) PDNN',val:'MA_M2_0806_P'}, +{txt:'Mouse Kidney M430v2 (Jul06) PDNN',val:'MA_M2_0706_P'}, +{txt:'Mouse Kidney M430v2 (Jul06) RMA',val:'MA_M2_0706_R'}, +{txt:'Barley1 Embryo0 gcRMA SCRI (Apr06)',val:'B150_K_0406_R'}, +{txt:'INIA Brain mRNA M430 (Jun06) RMA',val:'IBR_M_0606_R'}, +{txt:'Hippocampus Consortium M430v2 (Jun06) PDNN',val:'HC_M2_0606_P'}, +{txt:'Hippocampus Consortium M430v2 (Jun06) MAS5',val:'HC_M2_0606_M'}, +{txt:'Hippocampus Consortium M430v2 (Jun06) RMA',val:'HC_M2_0606_R'}, +{txt:'INIA Brain mRNA M430 (Jan06) RMA',val:'IBR_M_0106_R'}, +{txt:'INIA Brain mRNA M430 (Jan06) PDNN',val:'IBR_M_0106_P'}, +{txt:'Hippocampus Consortium M430v2 CXB (Dec05) RMA',val:'HC_M2CB_1205_R'}, +{txt:'Hippocampus Consortium M430v2 CXB (Dec05) PDNN',val:'HC_M2CB_1205_P'}, +{txt:'UTHSC Brain mRNA U74Av2 (Nov05) PDNN',val:'BR_U_1105_P'}, +{txt:'UMUTAffy Hippocampus Exon (Feb09) RMA',val:'UMUTAffyExon_0209_RMA'}, +{txt:'UTHSC Hippocampus Illumina v6.1 NON (Sep09) RankInv',val:'UT_ILM_BXD_hipp_NON_0909'}, +{txt:'UTHSC Hippocampus Illumina v6.1 NOS (Sep09) RankInv',val:'UT_ILM_BXD_hipp_NOS_0909'}, +{txt:'UTHSC Hippocampus Illumina v6.1 NOE (Sep09) RankInv',val:'UT_ILM_BXD_hipp_NOE_0909'}, +{txt:'UTHSC Hippocampus Illumina v6.1 RSS (Sep09) RankInv',val:'UT_ILM_BXD_hipp_RSS_0909'}, +{txt:'UTHSC Hippocampus Illumina v6.1 RSE (Sep09) RankInv',val:'UT_ILM_BXD_hipp_RSE_0909'}, +{txt:'OHSU/VA B6D2F2 Striatum M430v2 (Sep05) PDNN',val:'SA_M2_0905_P'}, +{txt:'OHSU/VA B6D2F2 Striatum M430v2 (Sep05) RMA',val:'SA_M2_0905_R'}, +{txt:'OHSU/VA B6D2F2 Striatum M430v2 (Sep05) MAS5',val:'SA_M2_0905_M'}, +{txt:'UTHSC Brain mRNA U74Av2 (Aug05) RMA',val:'BR_U_0805_R'}, +{txt:'UTHSC Brain mRNA U74Av2 (Aug05) PDNN',val:'BR_U_0805_P'}, +{txt:'UTHSC Brain mRNA U74Av2 (Aug05) MAS5',val:'BR_U_0805_M'}, +{txt:'MDC/CAS/ICL Peritoneal Fat 230A (Aug05) MAS5',val:'FT_2A_0805_M'}, +{txt:'OHSU/VA B6D2F2 Brain mRNA M430 (Aug05) RMA',val:'BRF2_M_0805_R'}, +{txt:'OHSU/VA B6D2F2 Brain mRNA M430 (Aug05) PDNN',val:'BRF2_M_0805_P'}, +{txt:'OHSU/VA B6D2F2 Brain mRNA M430 (Aug05) MAS5',val:'BRF2_M_0805_M'}, +{txt:'MDC/CAS/ICL Peritoneal Fat 230A (Jun05) RMA 2z+8',val:'FT_2A_0605_Rz'}, +{txt:'HBP Rosen Striatum M430V2 (Apr05) MAS5 Clean',val:'SA_M2_0405_MC'}, +{txt:'GE-NIAAA Cerebellum mRNA M430v2 (May05) PDNN',val:'GCB_M2_0505_P'}, +{txt:'GE-NIAAA Cerebellum mRNA M430v2 (May05) RMA',val:'GCB_M2_0505_R'}, +{txt:'GE-NIAAA Cerebellum mRNA M430v2 (May05) MAS5',val:'GCB_M2_0505_M'}, +{txt:'MDC/CAS/ICL Kidney 230A (Apr05) MAS5',val:'KI_2A_0405_M'}, +{txt:'HBP Rosen Striatum M430V2 (Apr05) RMA Clean',val:'SA_M2_0405_RC'}, +{txt:'HBP Rosen Striatum M430V2 (Apr05) PDNN Clean',val:'SA_M2_0405_PC'}, +{txt:'HBP Rosen Striatum M430V2 (Apr05) SScore',val:'SA_M2_0405_SS'}, +{txt:'HBP Rosen Striatum M430V2 (Apr05) RMA Orig',val:'SA_M2_0405_RR'}, +{txt:'MDC/CAS/ICL Kidney 230A (Apr05) RMA 2z+8',val:'KI_2A_0405_Rz'}, +{txt:'MDC/CAS/ICL Kidney 230A (Apr05) RMA',val:'KI_2A_0405_R'}, +{txt:'SJUT Cerebellum mRNA M430 (Mar05) PDNN',val:'CB_M_0305_P'}, +{txt:'SJUT Cerebellum mRNA M430 (Mar05) MAS5',val:'CB_M_0305_M'}, +{txt:'SJUT Cerebellum mRNA M430 (Mar05) RMA',val:'CB_M_0305_R'}, +{txt:'HQF Striatum Exon (Feb09) RMA',val:'Striatum_Exon_0209'}, +{txt:'BIDMC/UTHSC Dev Neocortex P14 ILMv6.2 (Nov10) RankInv',val:'DevNeocortex_ILM6.2P14RInv_1110'}, +{txt:'BIDMC/UTHSC Dev Striatum P14 ILMv6.2 (Nov10) RankInv **',val:'DevStriatum_ILM6.2P14RInv_1110'}, +{txt:'BIDMC/UTHSC Dev Striatum P3 ILMv6.2 (Nov10) RankInv **',val:'DevStriatum_ILM6.2P3RInv_1110'}, +{txt:'BIDMC/UTHSC Dev Neocortex P3 ILMv6.2 (Nov10) RankInv',val:'DevNeocortex_ILM6.2P3RInv_1110'}, +{txt:'SJUT Cerebellum mRNA M430 (Oct04) MAS5',val:'CB_M_1004_M'}, +{txt:'SJUT Cerebellum mRNA M430 (Oct04) PDNN',val:'CB_M_1004_P'}, +{txt:'SJUT Cerebellum mRNA M430 (Oct04) RMA',val:'CB_M_1004_R'}, +{txt:'(B6 x BTBR)F2-ob/ob Liver mRNA M430 (Jul04) MAS5',val:'LVF2_M_0704_M'}, +{txt:'(B6 x BTBR)F2-ob/ob Liver mRNA M430 (Jul04) RMA',val:'LVF2_M_0704_R'}, +{txt:'NCI Mammary mRNA M430 (July04) MAS5',val:'MA_M_0704_M'}, +{txt:'NCI Mammary mRNA M430 (July04) RMA',val:'MA_M_0704_R'}, +{txt:'OHSU/VA B6D2F2 Brain mRNA M430A (Mar04) PDNN',val:'BRF2_M_0304_P'}, +{txt:'OHSU/VA B6D2F2 Brain mRNA M430A (Mar04) RMA',val:'BRF2_M_0304_R'}, +{txt:'OHSU/VA B6D2F2 Brain mRNA M430A (Mar04) MAS5',val:'BRF2_M_0304_M'}, +{txt:'GNF Stem Cells U74Av2 (Mar04) RMA',val:'HC_U_0304_R'}, +{txt:'INIA Brain mRNA M430 (Feb04) PDNN',val:'CB_M_0204_P'}, +{txt:'SJUT Cerebellum mRNA M430 (Oct03) MAS5',val:'CB_M_1003_M'}, +{txt:'Hippocampus Illumina NOS (Oct08) RankInv beta',val:'Illum_LXS_Hipp_NOS_1008'}, +{txt:'Hippocampus Illumina RSE (Oct08) RankInv beta',val:'Illum_LXS_Hipp_RSE_1008'}, +{txt:'GSE9588 Human Liver Normal (Mar11) Females',val:'HLCF_0311'}, +{txt:'Hippocampus Illumina RSS (Oct08) RankInv beta',val:'Illum_LXS_Hipp_RSS_1008'}, +{txt:'Hippocampus Illumina NOE (Oct08) RankInv beta',val:'Illum_LXS_Hipp_NOE_1008'}, +{txt:'Hippocampus Illumina NON (Oct08) RankInv beta',val:'Illum_LXS_Hipp_NON_1008'}, +{txt:'CANDLE Published Phenotypes',val:'CANDLEPublish'}, +{txt:'HLC Published Phenotypes',val:'HLCPublish'}, +{txt:'AKXD Genotypes',val:'AKXDGeno'}, +{txt:'AXBXA Published Phenotypes',val:'AXBXAPublish'}, +{txt:'AXBXA Genotypes',val:'AXBXAGeno'}, +{txt:'B6BTBRF2 Published Phenotypes',val:'B6BTBRF2Publish'}, +{txt:'B6BTBRF2 Genotypes',val:'B6BTBRF2Geno'}, +{txt:'B6D2F2 Genotypes',val:'B6D2F2Geno'}, +{txt:'BDF2-1999 Genotypes',val:'BDF2-1999Geno'}, +{txt:'BDF2-2005 Genotypes',val:'BDF2-2005Geno'}, +{txt:'BHF2 Genotypes',val:'BHF2Geno'}, +{txt:'BHHBF2 Genotypes',val:'BHHBF2Geno'}, +{txt:'BXD Published Phenotypes',val:'BXDPublish'}, +{txt:'BXD Genotypes',val:'BXDGeno'}, +{txt:'BXH Published Phenotypes',val:'BXHPublish'}, +{txt:'BXH Genotypes',val:'BXHGeno'}, +{txt:'CTB6F2 Published Phenotypes',val:'CTB6F2Publish'}, +{txt:'CTB6F2 Genotypes',val:'CTB6F2Geno'}, +{txt:'CXB Published Phenotypes',val:'CXBPublish'}, +{txt:'CXB Genotypes',val:'CXBGeno'}, +{txt:'LXS Published Phenotypes',val:'LXSPublish'}, +{txt:'LXS Genotypes',val:'LXSGeno'}, +{txt:'Mouse Phenome Database',val:'MDPPublish'}, +{txt:'MDP Genotypes',val:'MDPGeno'}, +{txt:'NZBXFVB-N2 Published Phenotypes',val:'NZBXFVB-N2Publish'}, +{txt:'HXBBXH Published Phenotypes',val:'HXBBXHPublish'}, +{txt:'HXBBXH Genotypes',val:'HXBBXHGeno'}, +{txt:'BayXSha Published Phenotypes',val:'BayXShaPublish'}, +{txt:'BayXSha Genotypes',val:'BayXShaGeno'}, +{txt:'ColXBur Published Phenotypes',val:'ColXBurPublish'}, +{txt:'ColXBur Genotypes',val:'ColXBurGeno'}, +{txt:'ColXCvi Published Phenotypes',val:'ColXCviPublish'}, +{txt:'ColXCvi Genotypes',val:'ColXCviGeno'}, +{txt:'SXM Published Phenotypes',val:'SXMPublish'}, +{txt:'SXM Genotypes',val:'SXMGeno'}, +{txt:'J12XJ58F2 Published Phenotypes',val:'J12XJ58F2Publish'}, +{txt:'LXP Published Phenotypes',val:'LXPPublish'}, +{txt:'All Phenotypes',val:'_allPublish'}]; + +var lArr = [ + null, +[1,1,4,79], +[1,1,4,80], +[1,1,4,127], +[1,1,4,128], +[1,2,4,1], +[1,2,4,2], +[1,2,4,126], +[1,14,59,288], +[1,14,34,32], +[1,15,26,119], +[1,15,26,142], +[1,21,8,60], +[1,21,8,61], +[1,21,8,63], +[1,21,8,67], +[1,21,42,62], +[1,21,42,65], +[1,21,42,66], +[1,21,42,69], +[1,21,46,64], +[1,21,46,68], +[1,21,46,70], +[1,21,46,71], +[1,22,59,289], +[1,22,24,76], +[1,22,24,77], +[1,22,24,284], +[1,25,3,33], +[1,25,6,37], +[1,25,7,36], +[1,25,9,54], +[1,25,10,56], +[1,25,11,53], +[1,25,14,38], +[1,25,17,51], +[1,25,19,46], +[1,25,21,47], +[1,25,28,55], +[1,25,29,52], +[1,25,30,49], +[1,25,36,58], +[1,25,37,59], +[1,25,38,57], +[1,25,40,50], +[1,25,41,45], +[1,25,43,34], +[1,25,44,48], +[1,25,45,39], +[1,25,46,42], +[1,25,49,40], +[1,25,52,35], +[1,25,54,41], +[1,25,55,43], +[1,25,57,44], +[2,30,3,14], +[2,30,4,108], +[2,30,17,12], +[2,30,35,7], +[2,30,42,107], +[3,3,60,290], +[3,3,27,135], +[3,3,27,274], +[3,3,27,275], +[3,4,59,291], +[3,4,60,292], +[3,4,13,144], +[3,5,59,293], +[3,5,60,294], +[3,5,24,272], +[3,5,24,273], +[3,6,60,295], +[3,6,4,246], +[3,6,4,247], +[3,6,4,248], +[3,6,4,276], +[3,6,4,277], +[3,6,4,278], +[3,8,60,296], +[3,8,24,183], +[3,9,60,297], +[3,9,49,239], +[3,9,49,240], +[3,9,49,241], +[3,10,60,298], +[3,10,1,158], +[3,10,1,159], +[3,10,1,182], +[3,10,4,156], +[3,10,4,157], +[3,10,4,185], +[3,10,24,164], +[3,10,24,165], +[3,10,24,186], +[3,10,32,174], +[3,10,32,175], +[3,10,32,184], +[3,11,60,299], +[3,11,1,172], +[3,11,1,173], +[3,11,1,178], +[3,11,4,166], +[3,11,4,171], +[3,11,4,179], 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+[4,26,20,259], +[4,26,20,260], +[4,26,24,136], +[4,26,39,245], +[4,26,39,249], +[4,35,13,218], +[5,20,58,82], +[5,33,58,109], +[5,33,58,110], +[6,7,59,315], +[6,7,60,316], +[6,16,59,317], +[6,16,60,318], +[6,17,59,319], +[6,17,60,320], +[7,34,22,122], +[7,34,22,123], +[7,34,22,124], +[7,34,22,125], +[7,36,59,321], +[7,36,60,322], +[7,36,12,211], +[7,36,12,215], +[7,36,12,223], +[7,36,22,212], +[7,36,22,213], +[7,36,22,214], +[8,27,59,323], +[9,28,59,324], +[10,37,59,325]]; + + diff --git a/wqflask/wqflask/static/new/javascript/dataset_select_menu.coffee b/wqflask/wqflask/static/new/javascript/dataset_select_menu.coffee new file mode 100644 index 00000000..c9bd91f1 --- /dev/null +++ b/wqflask/wqflask/static/new/javascript/dataset_select_menu.coffee @@ -0,0 +1,370 @@ +# +#* function: based on different browser use, will have different initial actions; +#* Once the index.html page is loaded, this function will be called +# +initialDatasetSelection = -> + defaultSpecies = getDefaultValue("species") + defaultSet = getDefaultValue("cross") + defaultType = getDefaultValue("tissue") + defaultDB = getDefaultValue("database") + if navigator.userAgent.indexOf("MSIE") >= 0 + sOptions = fillOptionsForIE(null, defaultSpecies) + menu0 = "<SELECT NAME='species' ID='species' SIZE='1' onChange='fillOptions(\"species\");'>" + sOptions + "</Select>" + document.getElementById("menu0").innerHTML = menu0 + gOptions = fillOptionsForIE("species", defaultSet) + menu1 = "<Select NAME='cross' size=1 id='cross' onchange='fillOptions(\"cross\");'>" + gOptions + "</Select><input type=\"button\" class=\"button\" value=\"Info\" onCLick=\"javascript:crossinfo();\">" + document.getElementById("menu1").innerHTML = menu1 + tOptions = fillOptionsForIE("cross", defaultType) + menu2 = "<Select NAME='tissue' size=1 id='tissue' onchange='fillOptions(\"tissue\");'>" + tOptions + "</Select>" + document.getElementById("menu2").innerHTML = menu2 + dOptions = fillOptionsForIE("tissue", defaultDB) + menu3 = "<Select NAME='database' size=1 id='database'>" + dOptions + "</Select><input type=\"button\" class=\"button\" value=\"Info\" onCLick=\"javascript:databaseinfo();\">" + document.getElementById("menu3").innerHTML = menu3 + else + fillOptions null + searchtip() + +# +#* input: selectObjId (designated select menu, such as species, cross, etc... ) +#* defaultValue (default Value of species, cross,tissue or database) +#* function: special for IE browser,setting options value for select menu dynamically based on linkage array(lArr), +#* output: options string +# +fillOptionsForIE = (selectObjId, defaultValue) -> + options = "" + unless selectObjId? + len = sArr.length + i = 1 + + while i < len + + # setting Species' option + if sArr[i].val is defaultValue + options = options + "<option selected=\"selected\" value='" + sArr[i].val + "'>" + sArr[i].txt + "</option>" + else + options = options + "<option value='" + sArr[i].val + "'>" + sArr[i].txt + "</option>" + i++ + else if selectObjId is "species" + speciesObj = document.getElementById("species") + len = lArr.length + arr = [] + idx = 0 + i = 1 + + while i < len + + #get group(cross) info from lArr + arr[idx++] = lArr[i][1] if lArr[i][0] is (getIndexByValue("species", speciesObj.value)).toString() and not Contains(arr, lArr[i][1]) + i++ + idx = 0 + len = arr.length + removeOptions "cross" + i = 0 + + while i < len + + # setting Group's option + if gArr[arr[i]].val is defaultValue + options = options + "<option selected=\"selected\" value='" + gArr[arr[i]].val + "'>" + gArr[arr[i]].txt + "</option>" + else + options = options + "<option value='" + gArr[arr[i]].val + "'>" + gArr[arr[i]].txt + "</option>" + i++ + else if selectObjId is "cross" + speciesObj = document.getElementById("species") + groupObj = document.getElementById("cross") + len = lArr.length + arr = [] + idx = 0 + i = 1 + + while i < len + + #get type(tissue) info from lArr + arr[idx++] = lArr[i][2] if lArr[i][0] is (getIndexByValue("species", speciesObj.value)).toString() and lArr[i][1] is (getIndexByValue("cross", groupObj.value)).toString() and not Contains(arr, lArr[i][2]) + i++ + idx = 0 + len = arr.length + removeOptions "tissue" + i = 0 + + while i < len + + # setting Type's option + if tArr[arr[i]].val is defaultValue + options = options + "<option selected=\"selected\" value='" + tArr[arr[i]].val + "'>" + tArr[arr[i]].txt + "</option>" + else + options = options + "<option value='" + tArr[arr[i]].val + "'>" + tArr[arr[i]].txt + "</option>" + i++ + else if selectObjId is "tissue" + speciesObj = document.getElementById("species") + groupObj = document.getElementById("cross") + typeObj = document.getElementById("tissue") + len = lArr.length + arr = [] + idx = 0 + i = 1 + + while i < len + + #get dataset(database) info from lArr + arr[idx++] = lArr[i][3] if lArr[i][0] is (getIndexByValue("species", speciesObj.value)).toString() and lArr[i][1] is (getIndexByValue("cross", groupObj.value)).toString() and lArr[i][2] is (getIndexByValue("tissue", typeObj.value)).toString() and not Contains(arr, lArr[i][3]) + i++ + idx = 0 + len = arr.length + removeOptions "database" + i = 0 + + while i < len + + # setting Database's option + if dArr[arr[i]].val is defaultValue + options = options + "<option SELECTED value='" + dArr[arr[i]].val + "'>" + dArr[arr[i]].txt + "</option>" + else + options = options + "<option value='" + dArr[arr[i]].val + "'>" + dArr[arr[i]].txt + "</option>" + i++ + options + +# +#* input: selectObjId (designated select menu, such as species, cross, etc... ) +#* function: setting options value for select menu dynamically based on linkage array(lArr) +#* output: null +# +fillOptions = (selectObjId) -> + unless selectObjId? + speciesObj = document.getElementById("species") + len = sArr.length + i = 1 + + while i < len + + # setting Species' option + speciesObj.options[i - 1] = new Option(sArr[i].txt, sArr[i].val) + i++ + updateChocie "species" + else if selectObjId is "species" + speciesObj = document.getElementById("species") + groupObj = document.getElementById("cross") + len = lArr.length + arr = [] + idx = 0 + i = 1 + + while i < len + + #get group(cross) info from lArr + arr[idx++] = lArr[i][1] if lArr[i][0] is (getIndexByValue("species", speciesObj.value)).toString() and not Contains(arr, lArr[i][1]) + i++ + idx = 0 + len = arr.length + removeOptions "cross" + i = 0 + + while i < len + + # setting Group's option + groupObj.options[idx++] = new Option(gArr[arr[i]].txt, gArr[arr[i]].val) + i++ + updateChocie "cross" + else if selectObjId is "cross" + speciesObj = document.getElementById("species") + groupObj = document.getElementById("cross") + typeObj = document.getElementById("tissue") + len = lArr.length + arr = [] + idx = 0 + i = 1 + + while i < len + + #get type(tissue) info from lArr + arr[idx++] = lArr[i][2] if lArr[i][0] is (getIndexByValue("species", speciesObj.value)).toString() and lArr[i][1] is (getIndexByValue("cross", groupObj.value)).toString() and not Contains(arr, lArr[i][2]) + i++ + idx = 0 + len = arr.length + removeOptions "tissue" + i = 0 + + while i < len + + # setting Type's option + typeObj.options[idx++] = new Option(tArr[arr[i]].txt, tArr[arr[i]].val) + i++ + updateChocie "tissue" + else if selectObjId is "tissue" + speciesObj = document.getElementById("species") + groupObj = document.getElementById("cross") + typeObj = document.getElementById("tissue") + databaseObj = document.getElementById("database") + len = lArr.length + arr = [] + idx = 0 + i = 1 + + while i < len + + #get dataset(database) info from lArr + arr[idx++] = lArr[i][3] if lArr[i][0] is (getIndexByValue("species", speciesObj.value)).toString() and lArr[i][1] is (getIndexByValue("cross", groupObj.value)).toString() and lArr[i][2] is (getIndexByValue("tissue", typeObj.value)).toString() and not Contains(arr, lArr[i][3]) + i++ + idx = 0 + len = arr.length + removeOptions "database" + i = 0 + + while i < len + + # setting Database's option + databaseObj.options[idx++] = new Option(dArr[arr[i]].txt, dArr[arr[i]].val) + i++ + updateChocie "database" + +# +#* input: arr (targeted array); obj (targeted value) +#* function: check whether targeted array contains targeted value or not +#* output: return true, if array contains targeted value, otherwise return false +# +Contains = (arr, obj) -> + i = arr.length + return true if arr[i] is obj while i-- + false + +# +#* input: selectObj (designated select menu, such as species, cross, etc... ) +#* function: clear designated select menu's option +#* output: null +# +removeOptions = (selectObj) -> + selectObj = document.getElementById(selectObj) unless typeof selectObj is "object" + len = selectObj.options.length + i = 0 + + while i < len + + # clear current selection + selectObj.options[0] = null + i++ + +# +#* input: selectObjId (designated select menu, such as species, cross, etc... ) +#* Value: target value +#* function: retrieve Index info of target value in designated array +#* output: index info +# +getIndexByValue = (selectObjId, val) -> + if selectObjId is "species" + i = 1 + + while i < sArr.length + return i if sArr[i].val is val + i++ + else if selectObjId is "cross" + i = 1 + + while i < gArr.length + return i if gArr[i].val is val + i++ + else if selectObjId is "tissue" + i = 1 + + while i < tArr.length + return i if tArr[i].val is val + i++ + else + return + +# +#* input: objId (designated select menu, such as species, cross, etc... ) +#* val(targeted value) +#* function: setting option's selected status for designated select menu based on target value, also update the following select menu in the main search page +#* output: return true if selected status has been set, otherwise return false. +# +setChoice = (objId, val) -> + Obj = document.getElementById(objId) + idx = -1 + i = 0 + while i < Obj.options.length + if Obj.options[i].value is val + idx = i + break + i++ + if idx >= 0 + + #setting option's selected status + Obj.options[idx].selected = true + + #update the following select menu + fillOptions objId + else + Obj.options[0].selected = true + fillOptions objId + +# setting option's selected status based on default setting or cookie setting for Species, Group, Type and Database select menu in the main search page http://www.genenetwork.org/ +updateChocie = (selectObjId) -> + if selectObjId is "species" + defaultSpecies = getDefaultValue("species") + + #setting option's selected status + setChoice "species", defaultSpecies + else if selectObjId is "cross" + defaultSet = getDefaultValue("cross") + + #setting option's selected status + setChoice "cross", defaultSet + else if selectObjId is "tissue" + defaultType = getDefaultValue("tissue") + + #setting option's selected status + setChoice "tissue", defaultType + else if selectObjId is "database" + defaultDB = getDefaultValue("database") + + #setting option's selected status + setChoice "database", defaultDB + +#get default value;if cookie exists, then use cookie value, otherwise use default value +getDefaultValue = (selectObjId) -> + + #define default value + defaultSpecies = "mouse" + defaultSet = "BXD" + defaultType = "Hippocampus" + defaultDB = "HC_M2_0606_P" + if selectObjId is "species" + + #if cookie exists, then use cookie value, otherwise use default value + cookieSpecies = getCookie("defaultSpecies") + defaultSpecies = cookieSpecies if cookieSpecies + defaultSpecies + else if selectObjId is "cross" + cookieSet = getCookie("defaultSet") + defaultSet = cookieSet if cookieSet + defaultSet + else if selectObjId is "tissue" + cookieType = getCookie("defaultType") + defaultType = cookieType if cookieType + defaultType + else if selectObjId is "database" + cookieDB = getCookie("defaultDB") + defaultDB = cookieDB if cookieDB + defaultDB + +#setting default value into cookies for the dropdown menus: Species,Group, Type, and Database +setDefault = (thisform) -> + setCookie "cookieTest", "cookieTest", 1 + cookieTest = getCookie("cookieTest") + delCookie "cookieTest" + if cookieTest + defaultSpecies = thisform.species.value + setCookie "defaultSpecies", defaultSpecies, 10 + defaultSet = thisform.cross.value + setCookie "defaultSet", defaultSet, 10 + defaultType = thisform.tissue.value + setCookie "defaultType", defaultType, 10 + defaultDB = thisform.database.value + setCookie "defaultDB", defaultDB, 10 + updateChocie "species" + updateChocie "cross" + updateChocie "tissue" + updateChocie "database" + alert "The current settings are now your default" + else + alert "You need to enable Cookies in your browser."
\ No newline at end of file diff --git a/wqflask/wqflask/static/new/javascript/dataset_select_menu.js b/wqflask/wqflask/static/new/javascript/dataset_select_menu.js new file mode 100644 index 00000000..d96d7b44 --- /dev/null +++ b/wqflask/wqflask/static/new/javascript/dataset_select_menu.js @@ -0,0 +1,363 @@ +// Generated by CoffeeScript 1.3.3 +(function() { + var Contains, fillOptions, fillOptionsForIE, getDefaultValue, getIndexByValue, initialDatasetSelection, removeOptions, setChoice, setDefault, updateChocie; + + initialDatasetSelection = function() { + var dOptions, defaultDB, defaultSet, defaultSpecies, defaultType, gOptions, menu0, menu1, menu2, menu3, sOptions, tOptions; + defaultSpecies = getDefaultValue("species"); + defaultSet = getDefaultValue("cross"); + defaultType = getDefaultValue("tissue"); + defaultDB = getDefaultValue("database"); + if (navigator.userAgent.indexOf("MSIE") >= 0) { + sOptions = fillOptionsForIE(null, defaultSpecies); + menu0 = "<SELECT NAME='species' ID='species' SIZE='1' onChange='fillOptions(\"species\");'>" + sOptions + "</Select>"; + document.getElementById("menu0").innerHTML = menu0; + gOptions = fillOptionsForIE("species", defaultSet); + menu1 = "<Select NAME='cross' size=1 id='cross' onchange='fillOptions(\"cross\");'>" + gOptions + "</Select><input type=\"button\" class=\"button\" value=\"Info\" onCLick=\"javascript:crossinfo();\">"; + document.getElementById("menu1").innerHTML = menu1; + tOptions = fillOptionsForIE("cross", defaultType); + menu2 = "<Select NAME='tissue' size=1 id='tissue' onchange='fillOptions(\"tissue\");'>" + tOptions + "</Select>"; + document.getElementById("menu2").innerHTML = menu2; + dOptions = fillOptionsForIE("tissue", defaultDB); + menu3 = "<Select NAME='database' size=1 id='database'>" + dOptions + "</Select><input type=\"button\" class=\"button\" value=\"Info\" onCLick=\"javascript:databaseinfo();\">"; + document.getElementById("menu3").innerHTML = menu3; + } else { + fillOptions(null); + } + return searchtip(); + }; + + fillOptionsForIE = function(selectObjId, defaultValue) { + var arr, groupObj, i, idx, len, options, speciesObj, typeObj; + options = ""; + if (selectObjId == null) { + len = sArr.length; + i = 1; + while (i < len) { + if (sArr[i].val === defaultValue) { + options = options + "<option selected=\"selected\" value='" + sArr[i].val + "'>" + sArr[i].txt + "</option>"; + } else { + options = options + "<option value='" + sArr[i].val + "'>" + sArr[i].txt + "</option>"; + } + i++; + } + } else if (selectObjId === "species") { + speciesObj = document.getElementById("species"); + len = lArr.length; + arr = []; + idx = 0; + i = 1; + while (i < len) { + if (lArr[i][0] === (getIndexByValue("species", speciesObj.value)).toString() && !Contains(arr, lArr[i][1])) { + arr[idx++] = lArr[i][1]; + } + i++; + } + idx = 0; + len = arr.length; + removeOptions("cross"); + i = 0; + while (i < len) { + if (gArr[arr[i]].val === defaultValue) { + options = options + "<option selected=\"selected\" value='" + gArr[arr[i]].val + "'>" + gArr[arr[i]].txt + "</option>"; + } else { + options = options + "<option value='" + gArr[arr[i]].val + "'>" + gArr[arr[i]].txt + "</option>"; + } + i++; + } + } else if (selectObjId === "cross") { + speciesObj = document.getElementById("species"); + groupObj = document.getElementById("cross"); + len = lArr.length; + arr = []; + idx = 0; + i = 1; + while (i < len) { + if (lArr[i][0] === (getIndexByValue("species", speciesObj.value)).toString() && lArr[i][1] === (getIndexByValue("cross", groupObj.value)).toString() && !Contains(arr, lArr[i][2])) { + arr[idx++] = lArr[i][2]; + } + i++; + } + idx = 0; + len = arr.length; + removeOptions("tissue"); + i = 0; + while (i < len) { + if (tArr[arr[i]].val === defaultValue) { + options = options + "<option selected=\"selected\" value='" + tArr[arr[i]].val + "'>" + tArr[arr[i]].txt + "</option>"; + } else { + options = options + "<option value='" + tArr[arr[i]].val + "'>" + tArr[arr[i]].txt + "</option>"; + } + i++; + } + } else if (selectObjId === "tissue") { + speciesObj = document.getElementById("species"); + groupObj = document.getElementById("cross"); + typeObj = document.getElementById("tissue"); + len = lArr.length; + arr = []; + idx = 0; + i = 1; + while (i < len) { + if (lArr[i][0] === (getIndexByValue("species", speciesObj.value)).toString() && lArr[i][1] === (getIndexByValue("cross", groupObj.value)).toString() && lArr[i][2] === (getIndexByValue("tissue", typeObj.value)).toString() && !Contains(arr, lArr[i][3])) { + arr[idx++] = lArr[i][3]; + } + i++; + } + idx = 0; + len = arr.length; + removeOptions("database"); + i = 0; + while (i < len) { + if (dArr[arr[i]].val === defaultValue) { + options = options + "<option SELECTED value='" + dArr[arr[i]].val + "'>" + dArr[arr[i]].txt + "</option>"; + } else { + options = options + "<option value='" + dArr[arr[i]].val + "'>" + dArr[arr[i]].txt + "</option>"; + } + i++; + } + } + return options; + }; + + fillOptions = function(selectObjId) { + var arr, databaseObj, groupObj, i, idx, len, speciesObj, typeObj; + if (selectObjId == null) { + speciesObj = document.getElementById("species"); + len = sArr.length; + i = 1; + while (i < len) { + speciesObj.options[i - 1] = new Option(sArr[i].txt, sArr[i].val); + i++; + } + return updateChocie("species"); + } else if (selectObjId === "species") { + speciesObj = document.getElementById("species"); + groupObj = document.getElementById("cross"); + len = lArr.length; + arr = []; + idx = 0; + i = 1; + while (i < len) { + if (lArr[i][0] === (getIndexByValue("species", speciesObj.value)).toString() && !Contains(arr, lArr[i][1])) { + arr[idx++] = lArr[i][1]; + } + i++; + } + idx = 0; + len = arr.length; + removeOptions("cross"); + i = 0; + while (i < len) { + groupObj.options[idx++] = new Option(gArr[arr[i]].txt, gArr[arr[i]].val); + i++; + } + return updateChocie("cross"); + } else if (selectObjId === "cross") { + speciesObj = document.getElementById("species"); + groupObj = document.getElementById("cross"); + typeObj = document.getElementById("tissue"); + len = lArr.length; + arr = []; + idx = 0; + i = 1; + while (i < len) { + if (lArr[i][0] === (getIndexByValue("species", speciesObj.value)).toString() && lArr[i][1] === (getIndexByValue("cross", groupObj.value)).toString() && !Contains(arr, lArr[i][2])) { + arr[idx++] = lArr[i][2]; + } + i++; + } + idx = 0; + len = arr.length; + removeOptions("tissue"); + i = 0; + while (i < len) { + typeObj.options[idx++] = new Option(tArr[arr[i]].txt, tArr[arr[i]].val); + i++; + } + return updateChocie("tissue"); + } else if (selectObjId === "tissue") { + speciesObj = document.getElementById("species"); + groupObj = document.getElementById("cross"); + typeObj = document.getElementById("tissue"); + databaseObj = document.getElementById("database"); + len = lArr.length; + arr = []; + idx = 0; + i = 1; + while (i < len) { + if (lArr[i][0] === (getIndexByValue("species", speciesObj.value)).toString() && lArr[i][1] === (getIndexByValue("cross", groupObj.value)).toString() && lArr[i][2] === (getIndexByValue("tissue", typeObj.value)).toString() && !Contains(arr, lArr[i][3])) { + arr[idx++] = lArr[i][3]; + } + i++; + } + idx = 0; + len = arr.length; + removeOptions("database"); + i = 0; + while (i < len) { + databaseObj.options[idx++] = new Option(dArr[arr[i]].txt, dArr[arr[i]].val); + i++; + } + return updateChocie("database"); + } + }; + + Contains = function(arr, obj) { + var i; + i = arr.length; + if ((function() { + var _results; + _results = []; + while (i--) { + _results.push(arr[i] === obj); + } + return _results; + })()) { + return true; + } + return false; + }; + + removeOptions = function(selectObj) { + var i, len, _results; + if (typeof selectObj !== "object") { + selectObj = document.getElementById(selectObj); + } + len = selectObj.options.length; + i = 0; + _results = []; + while (i < len) { + selectObj.options[0] = null; + _results.push(i++); + } + return _results; + }; + + getIndexByValue = function(selectObjId, val) { + var i; + if (selectObjId === "species") { + i = 1; + while (i < sArr.length) { + if (sArr[i].val === val) { + return i; + } + i++; + } + } else if (selectObjId === "cross") { + i = 1; + while (i < gArr.length) { + if (gArr[i].val === val) { + return i; + } + i++; + } + } else if (selectObjId === "tissue") { + i = 1; + while (i < tArr.length) { + if (tArr[i].val === val) { + return i; + } + i++; + } + } else { + + } + }; + + setChoice = function(objId, val) { + var Obj, i, idx; + Obj = document.getElementById(objId); + idx = -1; + i = 0; + while (i < Obj.options.length) { + if (Obj.options[i].value === val) { + idx = i; + break; + } + i++; + } + if (idx >= 0) { + Obj.options[idx].selected = true; + return fillOptions(objId); + } else { + Obj.options[0].selected = true; + return fillOptions(objId); + } + }; + + updateChocie = function(selectObjId) { + var defaultDB, defaultSet, defaultSpecies, defaultType; + if (selectObjId === "species") { + defaultSpecies = getDefaultValue("species"); + return setChoice("species", defaultSpecies); + } else if (selectObjId === "cross") { + defaultSet = getDefaultValue("cross"); + return setChoice("cross", defaultSet); + } else if (selectObjId === "tissue") { + defaultType = getDefaultValue("tissue"); + return setChoice("tissue", defaultType); + } else if (selectObjId === "database") { + defaultDB = getDefaultValue("database"); + return setChoice("database", defaultDB); + } + }; + + getDefaultValue = function(selectObjId) { + var cookieDB, cookieSet, cookieSpecies, cookieType, defaultDB, defaultSet, defaultSpecies, defaultType; + defaultSpecies = "mouse"; + defaultSet = "BXD"; + defaultType = "Hippocampus"; + defaultDB = "HC_M2_0606_P"; + if (selectObjId === "species") { + cookieSpecies = getCookie("defaultSpecies"); + if (cookieSpecies) { + defaultSpecies = cookieSpecies; + } + return defaultSpecies; + } else if (selectObjId === "cross") { + cookieSet = getCookie("defaultSet"); + if (cookieSet) { + defaultSet = cookieSet; + } + return defaultSet; + } else if (selectObjId === "tissue") { + cookieType = getCookie("defaultType"); + if (cookieType) { + defaultType = cookieType; + } + return defaultType; + } else if (selectObjId === "database") { + cookieDB = getCookie("defaultDB"); + if (cookieDB) { + defaultDB = cookieDB; + } + return defaultDB; + } + }; + + setDefault = function(thisform) { + var cookieTest, defaultDB, defaultSet, defaultSpecies, defaultType; + setCookie("cookieTest", "cookieTest", 1); + cookieTest = getCookie("cookieTest"); + delCookie("cookieTest"); + if (cookieTest) { + defaultSpecies = thisform.species.value; + setCookie("defaultSpecies", defaultSpecies, 10); + defaultSet = thisform.cross.value; + setCookie("defaultSet", defaultSet, 10); + defaultType = thisform.tissue.value; + setCookie("defaultType", defaultType, 10); + defaultDB = thisform.database.value; + setCookie("defaultDB", defaultDB, 10); + updateChocie("species"); + updateChocie("cross"); + updateChocie("tissue"); + updateChocie("database"); + return alert("The current settings are now your default"); + } else { + return alert("You need to enable Cookies in your browser."); + } + }; + +}).call(this); diff --git a/wqflask/wqflask/static/new/javascript/validation.js b/wqflask/wqflask/static/new/javascript/validation.js new file mode 100644 index 00000000..06ed196d --- /dev/null +++ b/wqflask/wqflask/static/new/javascript/validation.js @@ -0,0 +1,51 @@ +// Generated by CoffeeScript 1.3.3 +(function() { + + $(function() { + var remove_samples_is_valid, validate_remove_samples; + remove_samples_is_valid = function(input) { + var new_splats, pattern, splat, splats, _i, _len; + if (_.trim(input).length === 0) { + return true; + } + splats = input.split(","); + new_splats = (function() { + var _i, _len, _results; + _results = []; + for (_i = 0, _len = splats.length; _i < _len; _i++) { + input = splats[_i]; + _results.push(_.trim(input)); + } + return _results; + })(); + console.log("new_splats:", new_splats); + pattern = /^\d+\s*(?:-\s*\d+)?\s*$/; + for (_i = 0, _len = new_splats.length; _i < _len; _i++) { + splat = new_splats[_i]; + console.log("splat is:", splat); + if (!splat.match(pattern)) { + return false; + } + } + return true; + }; + validate_remove_samples = function() { + /* + Check if input for the remove samples function is valid and notify the user if not + */ + + var input; + input = $('#remove_samples_field').val(); + console.log("input is:", input); + if (remove_samples_is_valid(input)) { + console.log("input is valid"); + return $('#remove_samples_invalid').hide(); + } else { + console.log("input isn't valid"); + return $('#remove_samples_invalid').show(); + } + }; + return $('#remove_samples_field').change(validate_remove_samples); + }); + +}).call(this); diff --git a/wqflask/wqflask/templates/new_index_page.html b/wqflask/wqflask/templates/new_index_page.html index f2178f3c..1610c521 100644 --- a/wqflask/wqflask/templates/new_index_page.html +++ b/wqflask/wqflask/templates/new_index_page.html @@ -365,7 +365,7 @@ <p>Special thanks to CYP1A2 and AHR.</p> <br /> <p>GeneNetwork is supported by:</p> - <UL> + <UL> <LI> <a target="_blank" href="http://citg.uthsc.edu"> The UT Center for Integrative and Translational Genomics @@ -386,7 +386,7 @@ <a target="_blank" href="http://www.nbirn.net/TestBeds/Mouse/index.htm">BIRN</A> (U24 RR021760) </li> - </UL> + </UL> <!--</p>--> <ul class="footer-links"> |