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| -rw-r--r-- | wqflask/wqflask/wgcna/gn3_wgcna.py | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/wqflask/wqflask/wgcna/gn3_wgcna.py b/wqflask/wqflask/wgcna/gn3_wgcna.py new file mode 100644 index 00000000..2657a099 --- /dev/null +++ b/wqflask/wqflask/wgcna/gn3_wgcna.py @@ -0,0 +1,27 @@ +"""module contains code to consume gn3-wgcna api +and process data to be rendered by datatables +""" + + + +def process_wgcna_data(response): + """function for processing modeigene genes + for create row data for datataba""" + mod_eigens = response["output"]["ModEigens"] + + sample_names = response["input"]["sample_names"] + + mod_dataset = [[sample] for sample in sample_names] + + for _, mod_values in mod_eigens.items(): + for (index, _sample) in enumerate(sample_names): + mod_dataset[index].append(round(mod_values[index], 3)) + + return { + "col_names": ["sample_names", *mod_eigens.keys()], + "mod_dataset": mod_dataset + } + + +def process_image(): + pass \ No newline at end of file |