diff options
| -rw-r--r-- | wqflask/wqflask/api/mapping.py | 12 |
1 files changed, 1 insertions, 11 deletions
diff --git a/wqflask/wqflask/api/mapping.py b/wqflask/wqflask/api/mapping.py index 5ffcbd55..25643b4e 100644 --- a/wqflask/wqflask/api/mapping.py +++ b/wqflask/wqflask/api/mapping.py @@ -1,15 +1,7 @@ -import string - from base import data_set -from base import webqtlConfig from base.trait import create_trait, retrieve_sample_data -from utility import helper_functions -from wqflask.marker_regression import gemma_mapping, rqtl_mapping, qtlreaper_mapping, plink_mapping - -import utility.logger -logger = utility.logger.getLogger(__name__) - +from wqflask.marker_regression import gemma_mapping, rqtl_mapping def do_mapping_for_api(start_vars): assert('db' in start_vars) @@ -30,8 +22,6 @@ def do_mapping_for_api(start_vars): dataset.group.genofile = mapping_params['genofile'] genofile_samplelist = get_genofile_samplelist(dataset) - logger.debug("SAMPLES:", genofile_samplelist) - if (len(genofile_samplelist) > 0): for sample in genofile_samplelist: in_trait_data = False |