diff options
| -rw-r--r-- | wqflask/wqflask/correlation/correlation_gn3_api.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/wqflask/wqflask/correlation/correlation_gn3_api.py b/wqflask/wqflask/correlation/correlation_gn3_api.py index c2acd648..caa9b619 100644 --- a/wqflask/wqflask/correlation/correlation_gn3_api.py +++ b/wqflask/wqflask/correlation/correlation_gn3_api.py @@ -146,7 +146,7 @@ def lit_for_trait_list(corr_results, this_dataset, this_trait): geneid_dict = {trait_name: geneid for (trait_name, geneid) in geneid_dict.items() if trait_lists.get(trait_name)} - conn, _cursor_object = database_connector() + conn = database_connector() with conn: @@ -244,7 +244,7 @@ def compute_correlation(start_vars, method="pearson", compute_all=False): (this_trait_geneid, geneid_dict, species) = do_lit_correlation( this_trait, this_dataset) - conn, _cursor_object = database_connector() + conn = database_connector() with conn: correlation_results = compute_all_lit_correlation( conn=conn, trait_lists=list(geneid_dict.items()), |