diff options
| -rw-r--r-- | wqflask/utility/external.py | 9 | ||||
| -rw-r--r-- | wqflask/wqflask/marker_regression/marker_regression_gn1.py | 5 |
2 files changed, 12 insertions, 2 deletions
diff --git a/wqflask/utility/external.py b/wqflask/utility/external.py new file mode 100644 index 00000000..bd8cf584 --- /dev/null +++ b/wqflask/utility/external.py @@ -0,0 +1,9 @@ +# Call external program + +import os +import sys +import subprocess + +def shell(command): + if not subprocess.call(command, shell=True): + raise Exception("ERROR: failed on "+command) diff --git a/wqflask/wqflask/marker_regression/marker_regression_gn1.py b/wqflask/wqflask/marker_regression/marker_regression_gn1.py index 4edc1891..a68c9586 100644 --- a/wqflask/wqflask/marker_regression/marker_regression_gn1.py +++ b/wqflask/wqflask/marker_regression/marker_regression_gn1.py @@ -29,6 +29,7 @@ import string from math import * import piddle as pid import piddlePIL as pil +from piddle import Font import sys,os import cPickle import httplib, urllib @@ -941,7 +942,7 @@ class MarkerRegression(object): bootScale = bootScale[:-1] + [highestPercent] bootOffset = 50*fontZoom - bootScaleFont=pid.Font(ttf="verdana",size=13*fontZoom,bold=0) + bootScaleFont=Font(ttf="verdana",size=13*fontZoom,bold=0) canvas.drawRect(canvas.size[0]-bootOffset,yZero-bootHeightThresh,canvas.size[0]-bootOffset-15*zoom,yZero,fillColor = pid.yellow) canvas.drawLine(canvas.size[0]-bootOffset+4, yZero, canvas.size[0]-bootOffset, yZero, color=pid.black) canvas.drawString('0%' ,canvas.size[0]-bootOffset+10,yZero+5,font=bootScaleFont,color=pid.black) @@ -2259,7 +2260,7 @@ class MarkerRegression(object): chrFontZoom = 2 else: chrFontZoom = 1 - chrLabelFont=pid.Font(ttf="verdana",size=24*chrFontZoom,bold=0) + chrLabelFont=Font(ttf="verdana",size=24*chrFontZoom,bold=0) for i, _chr in enumerate(self.genotype): if (i % 2 == 0): |