diff options
| -rw-r--r-- | wqflask/tests/wqflask/marker_regression/test_gemma_mapping.py | 5 |
1 files changed, 2 insertions, 3 deletions
diff --git a/wqflask/tests/wqflask/marker_regression/test_gemma_mapping.py b/wqflask/tests/wqflask/marker_regression/test_gemma_mapping.py index a44ccb00..af20c1b8 100644 --- a/wqflask/tests/wqflask/marker_regression/test_gemma_mapping.py +++ b/wqflask/tests/wqflask/marker_regression/test_gemma_mapping.py @@ -28,13 +28,12 @@ class TestGemmaMapping(unittest.TestCase): dataset = AttributeSetter( {"group": AttributeSetter({"genofile": "genofile.geno"})}) - output_files = "file1" - use_loco = False + output_file = "file1" mock_parse_loco.return_value = [] this_trait = AttributeSetter({"name": "t1"}) result = run_gemma(this_trait=this_trait, this_dataset=dataset, samples=[], vals=[ - ], covariates="", use_loco=True, first_run=False, output_files=output_files) + ], covariates="", use_loco=True, first_run=False, output_files=output_file) expected_results = ([], "file1") self.assertEqual(expected_results, result) |