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-rwxr-xr-xwqflask/base/data_set.py6
-rw-r--r--wqflask/maintenance/get_group_samplelists.py2
2 files changed, 6 insertions, 2 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index ffc77299..58f08ae7 100755
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -260,7 +260,6 @@ class DatasetGroup(object):
if maternal and paternal:
self.parlist = [maternal, paternal]
-
def get_samplelist(self):
key = "samplelist:v4:" + self.name
print("key is:", key)
@@ -275,7 +274,10 @@ class DatasetGroup(object):
print(" self.samplelist: ", self.samplelist)
else:
print("Cache not hit")
- self.samplelist = get_group_samplelists.get_samplelist(self.name + ".geno")
+ try:
+ self.samplelist = get_group_samplelists.get_samplelist(self.name + ".geno")
+ except IOError:
+ self.samplelist = None
print("after get_samplelist")
Redis.set(key, json.dumps(self.samplelist))
Redis.expire(key, 60*5)
diff --git a/wqflask/maintenance/get_group_samplelists.py b/wqflask/maintenance/get_group_samplelists.py
index 99e22904..c9ec3872 100644
--- a/wqflask/maintenance/get_group_samplelists.py
+++ b/wqflask/maintenance/get_group_samplelists.py
@@ -8,6 +8,8 @@ from base import webqtlConfig
def process_genofiles(geno_dir=webqtlConfig.GENODIR):
+ print("Yabba")
+ #sys.exit("Dabba")
os.chdir(geno_dir)
for geno_file in glob.glob("*"):
if geno_file.lower().endswith(('.geno', '.geno.gz')):