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-rwxr-xr-xwqflask/wqflask/templates/index_page_orig.html3
1 files changed, 2 insertions, 1 deletions
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with an <b>inclusion</b> zone of 5 Mb around the parent gene.</li>
<li><b>transLRS=(15 1000 5)</b> or <b>transLOD=(2 8 5)</b> finds all trans eQTLs with peak LRS or LOD scores between lower and upper limits,
- with an <b>exclusion</b> zone of 5 Mb around the parent gene.</li>
+ with an <b>exclusion</b> zone of 5 Mb around the parent gene. You can also add a fourth term specifying which chromosome you want the transLRS to be on
+ (for example transLRS=(15 1000 5 7) would find all trans eQTLs with peak LRS on chromosome 7 that is also a trans eQTL with exclusionary zone of 5Mb).</li>
<li><b>POSITION=(Chr4 122 130) cisLRS=(9 999 10)</b>
finds all traits on Chr 4 from 122 and 155 Mb with cisLRS scores