diff options
Diffstat (limited to '.guix/modules')
-rw-r--r-- | .guix/modules/genenetwork2.scm | 45 |
1 files changed, 45 insertions, 0 deletions
diff --git a/.guix/modules/genenetwork2.scm b/.guix/modules/genenetwork2.scm new file mode 100644 index 00000000..46814c37 --- /dev/null +++ b/.guix/modules/genenetwork2.scm @@ -0,0 +1,45 @@ +;; Make sure you have the +;; https://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics +;; channel set up. +;; +;; To drop into a development environment, run +;; +;; guix shell -Df guix.scm +;; +;; To get a development environment in a container, run +;; +;; guix shell -C -Df guix.scm + +(define-module (genenetwork2)) +(use-modules (gn packages genenetwork) + (guix gexp) + (guix utils) + (guix git-download) + (guix packages) + (ice-9 popen) + (ice-9 rdelim)) + +(define %source-dir + (string-append (current-source-directory) + "/../..")) + +;; This isn't kept up-to-date. +(define %version + (call-with-input-file (string-append %source-dir "/VERSION") + (lambda (port) + (read-line port)))) + +(define (%version package) + (or (version-major+minor+point (package-version package)) + (version-major+minor (package-version package)))) + +(define-public genenetwork2-head + (package + (inherit genenetwork2) + (version (string-append (%version genenetwork2) "-HEAD")) + (source (local-file %source-dir "genenetwork2-checkout" + #:recursive? #t + #:select? (or (git-predicate %source-dir) + (const #t)))))) + +genenetwork2-head |