diff options
Diffstat (limited to '.github')
-rw-r--r-- | .github/ISSUE_TEMPLATE/bug_report.md | 28 | ||||
-rw-r--r-- | .github/ISSUE_TEMPLATE/feature_request.md | 30 | ||||
-rw-r--r-- | .github/ISSUE_TEMPLATE/user_story.md | 12 | ||||
-rw-r--r-- | .github/workflows/main.yml | 69 |
4 files changed, 0 insertions, 139 deletions
diff --git a/.github/ISSUE_TEMPLATE/bug_report.md b/.github/ISSUE_TEMPLATE/bug_report.md deleted file mode 100644 index af60c290..00000000 --- a/.github/ISSUE_TEMPLATE/bug_report.md +++ /dev/null @@ -1,28 +0,0 @@ ---- -name: Bug report -about: Create a report to help us improve -title: '[Bug] Bug Title' -labels: '' -assignees: '' - ---- - -**Describe the bug** -<!-- A clear and concise description of what the bug is. --> - -**To Reproduce** -<!-- Steps to reproduce the behavior --> - -**Expected behavior** -<!-- A clear and concise description of what you expected to happen. --> - -**Screenshots** -<!-- If applicable, add screenshots to help explain your problem. --> - -**Environment setup (please complete the following information):** -<!-- - OS: [e.g. Linux] --> -<!-- - Guix Version (optional) --> -<!-- - [Anything else you think is relevant] --> - -**Additional context** -<!-- Add any other context about the problem here. --> diff --git a/.github/ISSUE_TEMPLATE/feature_request.md b/.github/ISSUE_TEMPLATE/feature_request.md deleted file mode 100644 index 813974c1..00000000 --- a/.github/ISSUE_TEMPLATE/feature_request.md +++ /dev/null @@ -1,30 +0,0 @@ ---- -name: Feature request -about: Suggest a new feature for this project(Very Specific) -title: '[Feature] My-cool-feature' -labels: '' -assignees: '' - ---- - -## Is your feature request related to a problem? Please describe. -<!-- A clear and concise description of what the problem is. --> -<!-- Example: I'm always frustrated when [...] --> - -## Describe the solution you'd like -<!-- A clear and concise description of what you want to happen. --> - -## Describe alternatives you've considered -<!-- A clear and concise description of any alternative solutions or features you've considered. --> - -## User Stories (optional) -<!-- Example: --> -<!-- As a _[role or persona]_, I want _[goal/ need]_ so that _[why]_ --> -<!-- **Feature:** _[Brief description of feature]_ --> -<!-- _[Any additional descriptions on feature]_ --> -<!-- **Scenario:** -Please use _[Gherkin](https://cucumber.io/docs/gherkin/reference/)_ -here --> - -## Additional context -<!-- Add any other context or screenshots about the feature request here. --> diff --git a/.github/ISSUE_TEMPLATE/user_story.md b/.github/ISSUE_TEMPLATE/user_story.md deleted file mode 100644 index d46976ba..00000000 --- a/.github/ISSUE_TEMPLATE/user_story.md +++ /dev/null @@ -1,12 +0,0 @@ ---- -name: User Story -about: Suggest an idea for this project -title: ['Feature] My-cool-new-feature' -labels: '' -assignees: '' - ---- -<!-- As a _[role or persona]_, I want _[goal/ need]_ so that _[why]_ --> -<!-- **Feature:** _[Brief description of feature]_ --> -<!-- _[Any additional descriptions on feature]_ --> -<!-- **Scenario:** Please use _[Gherkin](https://cucumber.io/docs/gherkin/reference/)_ here --> diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml deleted file mode 100644 index 0cf4557f..00000000 --- a/.github/workflows/main.yml +++ /dev/null @@ -1,69 +0,0 @@ -name: tests - -# Run actions when pushing to the testing branch or when you create a -# PR against it -on: - push: - branches: [ testing ] - pull_request: - branches: [ testing ] - -jobs: - unittest: - runs-on: ubuntu-latest - container: bonfacekilz/genenetwork2:latest - - steps: - # First start with mariadb set then checkout. The checkout gives - # the mysqld enough time to start - - name: Set up mariadb - run: | - mysql_install_db --user=mysql --datadir=/usr/local/mysql - # Wait for the mysqld_safe process to start - mysqld_safe --user=mysql --datadir=/usr/local/mysql & - - # Use v1 of checkout since v2 fails - - name: Checkout Project - uses: actions/checkout@v1 - - # Redis is required by some of the tests 6379 - - name: Start Redis - run: | - /gn2-profile/bin/screen -dmLS redisconn /gn2-profile/bin/redis-server - - # Initialise the tables - - name: Bootstrap tables - run: | - mysql -u root -e "SHOW DATABASES;" - mysql -u root -e "CREATE DATABASE db_webqtl_s;" - mysql -u root -e "CREATE USER 'gn2'@'localhost' IDENTIFIED BY 'mysql_password';" - mysql -u root -e "GRANT ALL PRIVILEGES ON *.* TO 'gn2'@'localhost';FLUSH PRIVILEGES;" - - - name: Start Genenetwork as a Background Task - run: | - /gn2-profile/bin/screen -dm bash -c "env GN2_PROFILE=/gn2-profile \ - TMPDIR=/tmp SERVER_PORT=5004 \ - WEBSERVER_MODE=DEBUG LOG_LEVEL=DEBUG \ - GN_PROXY_URL='http://localhost:8080' \ - GN3_LOCAL_URL='http://localhost:8081' \ - GENENETWORK_FILES=/genotype_files/ bin/genenetwork2 \ - etc/default_settings.py" - - - name: Run the unit tests - run: | - env GN2_PROFILE=/gn2-profile \ - TMPDIR=/tmp SERVER_PORT=5004 \ - WEBSERVER_MODE=DEBUG LOG_LEVEL=DEBUG \ - GN_PROXY_URL='http://localhost:8080' \ - GN3_LOCAL_URL='http://localhost:8081' \ - GENENETWORK_FILES=/genotype_files/ bin/genenetwork2 \ - etc/default_settings.py -c -m unittest discover -v - - # - name: Test for Broken Links - # run: | - # env GN2_PROFILE=/gn2-profile \ - # TMPDIR=/tmp\ - # WEBSERVER_MODE=DEBUG LOG_LEVEL=DEBUG \ - # GENENETWORK_FILES=/genotype_files/ bin/genenetwork2 \ - # etc/default_settings.py -c \ - # $PWD/test/requests/links_scraper/genelinks.py |