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| author | zsloan | 2023-02-17 19:00:49 +0000 |
|---|---|---|
| committer | zsloan | 2023-02-17 19:00:49 +0000 |
| commit | edeae35d520ba26c0b0fd19136271892e605d0e3 (patch) | |
| tree | 79feb23239d0fb22e49e145baa09ee395ae8968f /wqflask | |
| parent | 00a8f9996f19a95d8f5840993d504e06cb585dfa (diff) | |
| download | genenetwork2-edeae35d520ba26c0b0fd19136271892e605d0e3.tar.gz | |
Default trait abbreviation to N/A and only set to pre/post_publication_abbreviation if they're not None
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/base/trait.py | 7 |
1 files changed, 5 insertions, 2 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index 7501306a..e1eca9d9 100644 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -487,12 +487,15 @@ def retrieve_trait_info(trait, dataset, get_qtl_info=False): # phenotype traits, then display the pre-publication description instead # of the post-publication description trait.description_display = "N/A" + trait.abbreviation = "N/A" if not trait.pubmed_id: - trait.abbreviation = trait.pre_publication_abbreviation + if trait.pre_publication_abbreviation: + trait.abbreviation = trait.pre_publication_abbreviation if trait.pre_publication_description: trait.description_display = trait.pre_publication_description else: - trait.abbreviation = trait.post_publication_abbreviation + if trait.post_publication_abbreviation: + trait.abbreviation = trait.post_publication_abbreviation if description: trait.description_display = description.strip() |