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| author | zsloan | 2022-03-22 20:24:24 +0000 |
|---|---|---|
| committer | zsloan | 2022-03-22 20:24:24 +0000 |
| commit | bf19869b8c721f3097f4d91e484db94c941bc288 (patch) | |
| tree | 07cca7f00588133147d59ee0d259c868182b14f4 /wqflask | |
| parent | 52b364b91c92f661d82afb4f5f59011aea429270 (diff) | |
| download | genenetwork2-bf19869b8c721f3097f4d91e484db94c941bc288.tar.gz | |
Fix way pair_scan is checked
Previously it would always register as True, due to being in the start_vars
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/marker_regression/run_mapping.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/marker_regression/run_mapping.py b/wqflask/wqflask/marker_regression/run_mapping.py index cf217a96..35678df9 100644 --- a/wqflask/wqflask/marker_regression/run_mapping.py +++ b/wqflask/wqflask/marker_regression/run_mapping.py @@ -238,7 +238,7 @@ class RunMapping: self.method = "em" self.model = start_vars['mapmodel_rqtl'] self.pair_scan = False - if 'pair_scan' in start_vars: + if start_vars['pair_scan'] == "true": self.pair_scan = True if self.permCheck and self.num_perm > 0: self.perm_output, self.suggestive, self.significant, results = rqtl_mapping.run_rqtl( |