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author | zsloan | 2018-04-16 10:46:56 -0500 |
---|---|---|
committer | GitHub | 2018-04-16 10:46:56 -0500 |
commit | a58a4c3b8ee4f7256a18c99542ff6a9f355c0a2e (patch) | |
tree | 1e7677fa1fa210a2a957855578cd3ac3a47b720b /wqflask | |
parent | 270f86c41f7c90cc4ca51bca0aec789a09a36a0e (diff) | |
parent | ebbc8c67c13b44df98ea3c2b355e86f77572543b (diff) | |
download | genenetwork2-a58a4c3b8ee4f7256a18c99542ff6a9f355c0a2e.tar.gz |
Merge pull request #317 from pjotrp/testing
Testing
Diffstat (limited to 'wqflask')
-rw-r--r-- | wqflask/base/anon_collection.py | 3 | ||||
-rw-r--r-- | wqflask/utility/elasticsearch_tools.py | 61 | ||||
-rw-r--r-- | wqflask/utility/svg.py | 2 | ||||
-rw-r--r-- | wqflask/wqflask/templates/new_security/login_user.html | 7 | ||||
-rw-r--r-- | wqflask/wqflask/user_manager.py | 35 |
5 files changed, 85 insertions, 23 deletions
diff --git a/wqflask/base/anon_collection.py b/wqflask/base/anon_collection.py index 8ee73296..dd1aa27f 100644 --- a/wqflask/base/anon_collection.py +++ b/wqflask/base/anon_collection.py @@ -1,6 +1,6 @@ class AnonCollection(TraitCollection):
- def __init__(self, anon_id)
+ def __init__(self, anon_id):
self.anon_id = anon_id
self.collection_members = Redis.smembers(self.anon_id)
print("self.collection_members is:", self.collection_members)
@@ -12,6 +12,7 @@ class AnonCollection(TraitCollection): print("traits_to_remove:", traits_to_remove)
for trait in traits_to_remove:
Redis.srem(self.anon_id, trait)
+
members_now = self.collection_members - traits_to_remove
print("members_now:", members_now)
print("Went from {} to {} members in set.".format(len(self.collection_members), len(members_now)))
diff --git a/wqflask/utility/elasticsearch_tools.py b/wqflask/utility/elasticsearch_tools.py index 1dba357d..76dcaebf 100644 --- a/wqflask/utility/elasticsearch_tools.py +++ b/wqflask/utility/elasticsearch_tools.py @@ -1,3 +1,44 @@ +# Elasticsearch support +# +# Some helpful commands to view the database: +# +# You can test the server being up with +# +# curl -H 'Content-Type: application/json' http://localhost:9200 +# +# List all indices +# +# curl -H 'Content-Type: application/json' 'localhost:9200/_cat/indices?v' +# +# To see the users index 'table' +# +# curl http://localhost:9200/users +# +# To list all user ids +# +# curl -H 'Content-Type: application/json' http://localhost:9200/users/local/_search?pretty=true -d ' +# { +# "query" : { +# "match_all" : {} +# }, +# "stored_fields": [] +# }' +# +# To view a record +# +# curl -H 'Content-Type: application/json' http://localhost:9200/users/local/_search?pretty=true -d ' +# { +# "query" : { +# "match" : { "email_address": "pjotr2017@thebird.nl"} +# } +# }' +# +# +# To delete the users index and data (dangerous!) +# +# curl -XDELETE -H 'Content-Type: application/json' 'localhost:9200/users' + + from elasticsearch import Elasticsearch, TransportError import logging @@ -7,7 +48,7 @@ logger = getLogger(__name__) from utility.tools import ELASTICSEARCH_HOST, ELASTICSEARCH_PORT def test_elasticsearch_connection(): - es = Elasticsearch(['http://'+ELASTICSEARCH_HOST+":"+ELASTICSEARCH_PORT+'/'], verify_certs=True) + es = Elasticsearch(['http://'+ELASTICSEARCH_HOST+":"+str(ELASTICSEARCH_PORT)+'/'], verify_certs=True) if not es.ping(): logger.warning("Elasticsearch is DOWN") @@ -24,15 +65,29 @@ def get_elasticsearch_connection(): "host": ELASTICSEARCH_HOST, "port": ELASTICSEARCH_PORT }]) if (ELASTICSEARCH_HOST and ELASTICSEARCH_PORT) else None + setup_users_index(es) + es_logger = logging.getLogger("elasticsearch") es_logger.setLevel(logging.INFO) es_logger.addHandler(logging.NullHandler()) - except: - logger.error("Failed to get elasticsearch connection") + except Exception as e: + logger.error("Failed to get elasticsearch connection", e) es = None return es +def setup_users_index(es_connection): + if es_connection: + index_settings = { + "properties": { + "email_address": { + "type": "keyword"}}} + + es_connection.indices.create(index='users', ignore=400) + es_connection.indices.close(index="users") + es_connection.indices.put_mapping(body=index_settings, index="users", doc_type="local") + es_connection.indices.open(index="users") + def get_user_by_unique_column(es, column_name, column_value, index="users", doc_type="local"): return get_item_by_unique_column(es, column_name, column_value, index=index, doc_type=doc_type) diff --git a/wqflask/utility/svg.py b/wqflask/utility/svg.py index 512bc9e6..db13b9d1 100644 --- a/wqflask/utility/svg.py +++ b/wqflask/utility/svg.py @@ -1029,7 +1029,7 @@ class drawing: try: xv.feed(svg) except: - raise "SVG is not well formed, see messages above" + raise Exception("SVG is not well formed, see messages above") else: print "SVG well formed" if __name__=='__main__': diff --git a/wqflask/wqflask/templates/new_security/login_user.html b/wqflask/wqflask/templates/new_security/login_user.html index 4a857c60..27b20ebf 100644 --- a/wqflask/wqflask/templates/new_security/login_user.html +++ b/wqflask/wqflask/templates/new_security/login_user.html @@ -31,16 +31,19 @@ <div> {% if external_login["github"]: %} <a href="{{external_login['github']}}" title="Login with GitHub" class="btn btn-info btn-group">Login with Github</a> + {% else %} + <p>Github login is not available right now</p> {% endif %} {% if external_login["orcid"]: %} <a href="{{external_login['orcid']}}" title="Login with ORCID" class="btn btn-info btn-group">Login with ORCID</a> + {% else %} + <p>ORCID login is not available right now</p> {% endif %} </div> {% else: %} <div class="alert alert-warning"> - <p>You cannot login with external services at this time.<br /> - Please try again later.</p> + <p>Sorry, you cannot login with Github or ORCID at this time.</p> </div> {% endif %} <hr /> diff --git a/wqflask/wqflask/user_manager.py b/wqflask/wqflask/user_manager.py index 5f6c818e..d652f2e9 100644 --- a/wqflask/wqflask/user_manager.py +++ b/wqflask/wqflask/user_manager.py @@ -727,30 +727,33 @@ def logout(): return response -@app.route("/n/forgot_password") +@app.route("/n/forgot_password", methods=['GET']) def forgot_password(): """Entry point for forgotten password""" - return render_template("new_security/forgot_password.html") + print("ARGS: ", request.args) + errors = {"no-email": request.args.get("no-email")} + print("ERRORS: ", errors) + return render_template("new_security/forgot_password.html", errors=errors) @app.route("/n/forgot_password_submit", methods=('POST',)) def forgot_password_submit(): """When a forgotten password form is submitted we get here""" params = request.form email_address = params['email_address'] - logger.debug("Wants to send password E-mail to ",email_address) - es = get_elasticsearch_connection() - user_details = get_user_by_unique_column(es, "email_address", email_address) - if user_details: - ForgotPasswordEmail(user_details["email_address"]) - # try: - # user = model.User.query.filter_by(email_address=email_address).one() - # except orm.exc.NoResultFound: - # flash("Couldn't find a user associated with the email address {}. Sorry.".format( - # email_address)) - # return redirect(url_for("login")) - # ForgotPasswordEmail(user) - return render_template("new_security/forgot_password_step2.html", - subject=ForgotPasswordEmail.subject) + next_page = None + if email_address != "": + logger.debug("Wants to send password E-mail to ",email_address) + es = get_elasticsearch_connection() + user_details = get_user_by_unique_column(es, "email_address", email_address) + if user_details: + ForgotPasswordEmail(user_details["email_address"]) + + return render_template("new_security/forgot_password_step2.html", + subject=ForgotPasswordEmail.subject) + + else: + flash("You MUST provide an email", "alert-danger") + return redirect(url_for("forgot_password")) @app.errorhandler(401) def unauthorized(error): |