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| author | zsloan | 2018-11-04 16:26:12 +0000 |
|---|---|---|
| committer | zsloan | 2018-11-04 16:26:12 +0000 |
| commit | abc53a8f47b39db3b7e5246a5cad3fa617a773ec (patch) | |
| tree | 4530016e3329a117c0be16a6789bf5795ed87fd6 /wqflask | |
| parent | 319879a9daf2c12d3919497d7e752600701e92d3 (diff) | |
| download | genenetwork2-abc53a8f47b39db3b7e5246a5cad3fa617a773ec.tar.gz | |
Fixed one more thing
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/marker_regression/gemma_mapping.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/marker_regression/gemma_mapping.py b/wqflask/wqflask/marker_regression/gemma_mapping.py index 1644bbf7..9e92838e 100644 --- a/wqflask/wqflask/marker_regression/gemma_mapping.py +++ b/wqflask/wqflask/marker_regression/gemma_mapping.py @@ -20,7 +20,7 @@ def run_gemma(this_trait, this_dataset, samples, vals, covariates, use_loco, maf else: genofile_name = this_dataset.group.name - trait_filename = this_trait.name + "_" + this_dataset.name + "_pheno" + trait_filename = str(this_trait.name) + "_" + str(this_dataset.name) + "_pheno" gen_pheno_txt_file(this_dataset, genofile_name, vals, trait_filename) if not os.path.isfile("{}{}_output.assoc.txt".format(webqtlConfig.GENERATED_IMAGE_DIR, genofile_name)): |