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| author | Pjotr Prins | 2015-03-17 10:39:58 +0300 |
|---|---|---|
| committer | Pjotr Prins | 2015-03-17 10:39:58 +0300 |
| commit | 7c958796142e9fe0cc3155d10581d68ae2bbc5df (patch) | |
| tree | 4949fc749c45f509e83b2f30a325516f85b1823a /wqflask | |
| parent | 7268ed46c9bce6fea58b55723c325426bdeeb617 (diff) | |
| download | genenetwork2-7c958796142e9fe0cc3155d10581d68ae2bbc5df.tar.gz | |
lmm.py: bring to original state
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/my_pylmm/pyLMM/lmm.py | 4 |
1 files changed, 0 insertions, 4 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/lmm.py b/wqflask/wqflask/my_pylmm/pyLMM/lmm.py index c42f9fb7..994b6be7 100644 --- a/wqflask/wqflask/my_pylmm/pyLMM/lmm.py +++ b/wqflask/wqflask/my_pylmm/pyLMM/lmm.py @@ -688,15 +688,11 @@ class LMM: optimum. """ - print("H=",H) - print("X=",X) - print("REML=",REML) n = len(self.LLs) HOpt = [] for i in range(1,n-2): if self.LLs[i-1] < self.LLs[i] and self.LLs[i] > self.LLs[i+1]: HOpt.append(optimize.brent(self.LL_brent,args=(X,REML),brack=(H[i-1],H[i+1]))) - print("HOpt=",HOpt) if np.isnan(HOpt[-1][0]): HOpt[-1][0] = [self.LLs[i-1]] |