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| author | Pjotr Prins | 2015-03-11 14:44:21 +0300 |
|---|---|---|
| committer | Pjotr Prins | 2015-03-11 14:44:21 +0300 |
| commit | 4bb1113a9c23882ad91634c7cb77537e47a09713 (patch) | |
| tree | 39007f8b9490b86c1fa7a473626418abe535cebd /wqflask | |
| parent | e492c9d3812ee2f6d6c7b640e216af09710b91d7 (diff) | |
| download | genenetwork2-4bb1113a9c23882ad91634c7cb77537e47a09713.tar.gz | |
runlmm.py: message
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/my_pylmm/pyLMM/runlmm.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py index bd6c55fc..5b777580 100644 --- a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py +++ b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py @@ -114,7 +114,7 @@ if y != None: v = np.isnan(y) keep = True - v if v.sum(): - if options.verbose: sys.stderr.write("Cleaning the phenotype vector by removing %d individuals...\n" % (v.sum())) + if options.verbose: sys.stderr.write("runlmm.py: Cleaning the phenotype vector by removing %d individuals...\n" % (v.sum())) y = y[keep] G = G[keep,:] if k != None: k = k[keep,:][:,keep] |