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| author | zsloan | 2021-08-25 19:05:07 +0000 |
|---|---|---|
| committer | zsloan | 2021-08-25 19:05:07 +0000 |
| commit | cc7c392198f73ac8e8419be1367ce566d85a873c (patch) | |
| tree | 8c72388bb2c6b4a03efcda5dfb2b0778d6d1b822 /wqflask | |
| parent | 582893c0cc87f87e5dfc7fe0209b2e4a3f85d4a4 (diff) | |
| download | genenetwork2-cc7c392198f73ac8e8419be1367ce566d85a873c.tar.gz | |
Fix issue where correlation results weren't included parents/f1s
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/correlation/correlation_gn3_api.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/correlation/correlation_gn3_api.py b/wqflask/wqflask/correlation/correlation_gn3_api.py index a78cb0b9..d0d4bcba 100644 --- a/wqflask/wqflask/correlation/correlation_gn3_api.py +++ b/wqflask/wqflask/correlation/correlation_gn3_api.py @@ -148,7 +148,7 @@ def lit_for_trait_list(corr_results, this_dataset, this_trait): def fetch_sample_data(start_vars, this_trait, this_dataset, target_dataset): sample_data = process_samples( - start_vars, this_dataset.group.samplelist) + start_vars, this_dataset.group.all_samples_ordered()) if target_dataset.type == "ProbeSet": target_dataset.get_probeset_data(list(sample_data.keys())) |